RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 IL4P05112 153 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 JMJD7P0C870 316 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF708P17019 499 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 OTX2P32243 289 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 LY6G6FQ5SQ64 297 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 SPACA9Q96E40 222 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 K7N7A8 449 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 PPP1R27Q86WC6 154 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 VN1R2Q8NFZ6 395 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 ATP6V0E2Q8NHE4 81 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 C16orf52Q8NHV5 167 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 ABHD3Q8WU67 409 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 EMC6Q9BV81 110 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 CHRNA10Q9GZZ6 450 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 LRP12Q9Y561 859 aa6.56□□□□□ -1.36
SYNPO2-202ENST00000429713 C1QCP02747 245 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 PI3P19957 117 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 RPS16P62249 146 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 TEX38Q6PEX7 206 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF664Q8N3J9 261 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 BAHD1Q8TBE0 780 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 A0A0G2JK05 382 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 LRRC3CA6NJW4 275 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 CRYBB3P26998 211 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 Q56UQ5 140 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 TPTE2P1Q5T6R2 138 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 HES3Q5TGS1 186 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 EMP1P54849 157 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 SOX8P57073 446 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 SPACA5Q96QH8 159 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 C3orf85A0A1B0GTC6 90 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 UBE2L5PA0A1B0GUS4 154 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 H0YIG0 161 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 LMX1BO60663 402 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF775Q96BV0 537 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 MS4A5Q9H3V2 200 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 FAM90A9PA6NNJ1 464 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 OPRK1P41145 380 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 MRPS21P82921 87 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 FOXK1P85037 733 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 LAMTOR3Q9UHA4 124 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 MRPS18CQ9Y3D5 142 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 LINC01387J3KSC0 135 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 PIAS2O75928 621 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 RPS27P42677 84 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF141Q15928 474 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 DNASE2BQ8WZ79 361 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 KBTBD11-OT1A0A1B0GTJ5 212 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 PSMB11A5LHX3 300 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 C2orf72A6NCS6 295 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 APOMO95445 188 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 IL3RAP26951 378 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 OR10V1Q8NGI7 309 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 PBOV1Q9GZY1 135 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 TNFRSF19Q9NS68 423 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 OR8I2Q8N0Y5 310 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 OR9G1Q8NH87 305 aa6.55□□□□□ -1.36
SYNPO2-202ENST00000429713 UBE2L3P68036 154 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 ZNF121P58317 390 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PSG6Q00889 435 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE5Q13069 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE6Q13070 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE13Q4V321 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 MTCH1Q9NZJ7 389 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 SEMA5BQ9P283 1151 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 CAPZBP47756 277 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 THSD4Q6ZMP0 1018 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 APOBEC4Q8WW27 367 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 TMEM56Q96MV1 263 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 OSTCQ9NRP0 149 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 DUSP13Q9UII6 198 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PPIHO43447 177 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 COL10A1Q03692 680 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 TIMP4Q99727 224 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 MRPL32Q9BYC8 188 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 C5orf66Q9H5L9 145 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE12JA6NER3 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE7O76087 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 FAHP16930 419 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 GAGE4Q13068 117 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PRAMEF5Q5TYX0 476 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PRAMEF6Q5VXH4 476 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 BATF2Q8N1L9 274 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 PPDPFLQ8WWR9 84 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 A0A0G2JLM5 398 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 A0A1B0GTH9 108 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 OOEPA6NGQ2 149 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 IER3P46695 156 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 HBBP68871 147 aa6.54□□□□□ -1.36
SYNPO2-202ENST00000429713 LINC01555Q8NAE3 123 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms