RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 OPA3Q9H6K4 179 aa9.93□□□□□ -0.82
PTPRN-204ENST00000423636 AHRRA9YTQ3 701 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 IFNA5P01569 189 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
PTPRN-204ENST00000423636 SPSB3Q6PJ21 355 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 RIMS4Q9H426 269 aaPredicted RBP9.92□□□□□ -0.82
PTPRN-204ENST00000423636 C11orf1Q9H5F2 150 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 FAM157AC9JC47 383 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 GPR12P47775 334 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF266Q14584 549 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 SOHLH1Q5JUK2 328 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF880Q6PDB4 577 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 UQCC3Q6UW78 93 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 FLNCQ14315 2725 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 A0A0G2JNJ9 132 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 IGKV1D-33P01593 117 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 IGKV1-33P01594 117 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 MMP9P14780 707 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
PTPRN-204ENST00000423636 SRPXP78539 464 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 H2BFWTQ7Z2G1 175 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 LYG1Q8N1E2 194 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 LRFN3Q9BTN0 628 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 CABLES2Q9BTV7 478 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 Q9UFV3 132 aa9.92□□□□□ -0.82
PTPRN-204ENST00000423636 UBE2G2P60604 165 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 SNRPEP62304 92 aaKnown RBP9.91□□□□□ -0.82
PTPRN-204ENST00000423636 BAXQ07812 192 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 HMGN3Q15651 99 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF726P1Q15940 193 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 HFEQ30201 348 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 IGFL2Q6UWQ7 119 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 GFRALQ6UXV0 394 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 FAM90A1Q86YD7 464 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 DOLPP1Q86YN1 238 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 ATP5SQ99766 215 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 SCRT1Q9BWW7 348 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 MBNL3Q9NUK0 354 aaKnown RBP9.91□□□□□ -0.82
PTPRN-204ENST00000423636 GLS2Q9UI32 602 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 RBFOX3A6NFN3 312 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 PITX3O75364 302 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 HNF1AP20823 631 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 CCKARP32238 428 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 LHFPL4Q7Z7J7 247 aa9.91□□□□□ -0.82
PTPRN-204ENST00000423636 OOEPA6NGQ2 149 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 CEACAM1P13688 526 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 CCL3L1P16619 93 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 CD82P27701 267 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 SULT1A1P50225 295 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 TNFAIP6P98066 277 aaPredicted RBP9.9□□□□□ -0.82
PTPRN-204ENST00000423636 SLC38A11Q08AI6 406 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 C4orf17Q53FE4 359 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 PRAMEF5Q5TYX0 476 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 Q8IYB0 196 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 ZNF645Q8N7E2 425 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.82
PTPRN-204ENST00000423636 MEGF10Q96KG7 1140 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 PATZ1Q9HBE1 687 aaKnown RBP9.9□□□□□ -0.82
PTPRN-204ENST00000423636 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
PTPRN-204ENST00000423636 POLQO75417 2590 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 NKX6-1P78426 367 aaPredicted RBP9.9□□□□□ -0.82
PTPRN-204ENST00000423636 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 MOB3BQ86TA1 216 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 ZFP57Q9NU63 452 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.82
PTPRN-204ENST00000423636 MARCH11A6NNE9 402 aa9.9□□□□□ -0.83
PTPRN-204ENST00000423636 TNFRSF9Q07011 255 aa9.9□□□□□ -0.83
PTPRN-204ENST00000423636 Q8TCH9 128 aa9.9□□□□□ -0.83
PTPRN-204ENST00000423636 WASF3Q9UPY6 502 aa9.9□□□□□ -0.83
PTPRN-204ENST00000423636 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 SPINT2O43291 252 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 IFNA10P01566 189 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 BSPH1Q075Z2 132 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 FAM122CQ6P4D5 195 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 Q6ZS49 121 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 Q6ZS92 163 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 SSMEM1Q8WWF3 244 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 GCM1Q9NP62 436 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 CARHSP1Q9Y2V2 147 aaKnown RBP9.89□□□□□ -0.83
PTPRN-204ENST00000423636 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 A0A1B0GU03 582 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 MLANAQ16655 118 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ASPHD1Q5U4P2 390 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 RBMS3Q6XE24 437 aaKnown RBP9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ZNF525Q8N782 197 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 LINC01560Q8TB33 94 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ACACBO00763 2458 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 MYO18BQ8IUG5 2567 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 TRGV8A0A0C4DH27 118 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 FAM90A27PA6NNH2 459 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 H3BQ15 152 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ZNF737O75373 536 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 PLAUP00749 431 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms