RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TRAPPC2BP0DI82 140 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 CCL3L1P16619 93 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 HCP5Q6MZN7 132 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 P2RX4Q99571 388 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 MARVELD1Q9BSK0 173 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 IL36RNQ9UBH0 155 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 PRRC2CQ9Y520 2896 aaKnown RBP8.22□□□□□ -1.09
CMSS1-201ENST00000421999 DVL1P1P54792 670 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-201ENST00000421999 ADIRFQ15847 76 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 OR8I2Q8N0Y5 310 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 POC1AQ8NBT0 407 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 DPM3Q9P2X0 92 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 FAM215AQ9Y5M1 114 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 DPRXA6NFQ7 191 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 HPRT1P00492 218 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 IGHV1-46P01743 117 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 NPY1RP25929 384 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 RHOBP62745 196 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 HGFACQ04756 655 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 SIGIRRQ6IA17 410 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 C11orf87Q6NUJ2 197 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 PCSK4Q6UW60 755 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-201ENST00000421999 BPIFCQ8NFQ6 507 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 OR4F17Q8NGA8 305 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 OR4F5Q8NH21 305 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 OR4F4Q96R69 305 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 HSF4Q9ULV5 492 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 CCL1P22362 96 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 UQCRFS1P47985 274 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-201ENST00000421999 DUSP18Q8NEJ0 188 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 NEUROG1Q92886 237 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 RABAC1Q9UI14 185 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 JPT1Q9UK76 154 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 RNF24Q9Y225 148 aa8.22□□□□□ -1.09
CMSS1-201ENST00000421999 EFNA4P52798 201 aa8.21□□□□□ -1.09
CMSS1-201ENST00000421999 C20orf204Q6ZNR8 217 aa8.21□□□□□ -1.09
CMSS1-201ENST00000421999 MMD2Q8IY49 270 aa8.21□□□□□ -1.09
CMSS1-201ENST00000421999 TNFSF13O75888 250 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 TFF1P04155 84 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 LOXL3P58215 753 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 TIGITQ495A1 244 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 HIST2H3PS2Q5TEC6 136 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 PXDC1Q5TGL8 231 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 WDR31Q8NA23 367 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 ADAD2Q8NCV1 583 aaKnown RBP8.21□□□□□ -1.1
CMSS1-201ENST00000421999 RPUSD4Q96CM3 377 aaKnown RBP8.21□□□□□ -1.1
CMSS1-201ENST00000421999 MS4A10Q96PG2 267 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 GFI1Q99684 422 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 MPC2O95563 127 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 HPXP02790 462 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 FOXL2NBQ6ZUU3 175 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 C15orf54Q8N8G6 183 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 Q8WTZ3 238 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 SSMEM1Q8WWF3 244 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 CLEC5AQ9NY25 188 aa8.21□□□□□ -1.1
CMSS1-201ENST00000421999 ZNF107Q9UII5 783 aaPredicted RBP8.21□□□□□ -1.1
CMSS1-201ENST00000421999 C12orf77C9JDV5 145 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 TXNL1O43396 289 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 OTX1P32242 354 aaPredicted RBP8.2□□□□□ -1.1
CMSS1-201ENST00000421999 RAG2P55895 527 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 RPL8P62917 257 aaKnown RBP8.2□□□□□ -1.1
CMSS1-201ENST00000421999 EXOSC2Q13868 293 aaKnown RBP8.2□□□□□ -1.1
CMSS1-201ENST00000421999 CLEC12BQ2HXU8 276 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 CLEC9AQ6UXN8 241 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 BLNKQ8WV28 456 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 TMEM186Q96B77 213 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 OR51B2Q9Y5P1 312 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 S100A4P26447 101 aaKnown RBP8.2□□□□□ -1.1
CMSS1-201ENST00000421999 HIST1H3AP68431 136 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 GAMTQ14353 236 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 SLC35E4Q6ICL7 350 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 WDR82Q6UXN9 313 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 HIST2H3AQ71DI3 136 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 OR13A1Q8NGR1 328 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 NEURL2Q9BR09 285 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 CEACAM18A8MTB9 384 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 PLAC9Q5JTB6 97 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 RNF144BQ7Z419 303 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 XIRP2A4UGR9 3374 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 LILRA1O75019 489 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 M6PRP20645 277 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 GZMKP49863 264 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 LFNGQ8NES3 379 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
CMSS1-201ENST00000421999 ZNF503-AS2A6NEH8 195 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 TMEM50BP56557 158 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 VAX1Q5SQQ9 334 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 SLC25A42Q86VD7 318 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 OR4C13Q8NGP0 309 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 WNK1Q9H4A3 2382 aa8.19□□□□□ -1.1
CMSS1-201ENST00000421999 PQLC2LA1A4F0 135 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms