RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ADMP35318 185 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 ZNF816Q0VGE8 651 aaPredicted RBP17.9■□□□□ 0.46
USP48-205ENST00000421625 DCAF10Q5QP82 559 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 NDUFB4O95168 129 aa17.89■□□□□ 0.45
USP48-205ENST00000421625 GCSAMLQ5JQS6 135 aa17.89■□□□□ 0.45
USP48-205ENST00000421625 TMEM208Q9BTX3 173 aa17.89■□□□□ 0.45
USP48-205ENST00000421625 FAM53AQ6NSI3 398 aaPredicted RBP17.89■□□□□ 0.45
USP48-205ENST00000421625 OR10P1Q8NGE3 313 aa17.89■□□□□ 0.45
USP48-205ENST00000421625 ZCCHC14Q8WYQ9 949 aaKnown RBP17.89■□□□□ 0.45
USP48-205ENST00000421625 MED12LQ86YW9 2145 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 CELSR3Q9NYQ7 3312 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 ODAMA1E959 279 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 CYC1P08574 325 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 ZNF573Q86YE8 665 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 RBFOX2O43251 390 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP48-205ENST00000421625 SS18L1O75177 396 aaPredicted RBP17.88■□□□□ 0.45
USP48-205ENST00000421625 CDC34P49427 236 aaPredicted RBP17.88■□□□□ 0.45
USP48-205ENST00000421625 ATP6V1FQ16864 119 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 SGMS2Q8NHU3 365 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 DEPPQ9NTK1 212 aa17.88■□□□□ 0.45
USP48-205ENST00000421625 MARCH11A6NNE9 402 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 NPSP0C0P6 89 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 RPL30P62888 115 aaKnown RBP17.87■□□□□ 0.45
USP48-205ENST00000421625 GNG3P63215 75 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 TOMM20LQ6UXN7 152 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 NUFIP2Q7Z417 695 aaKnown RBP17.87■□□□□ 0.45
USP48-205ENST00000421625 ZNF709Q8N972 641 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 ELOVL5Q9NYP7 299 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 USF3Q68DE3 2245 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 TRAV38-1A0A0B4J264 116 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 ANKRD30BLA7E2S9 258 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 CA6P23280 308 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 OR3A1P47881 315 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 SRYQ05066 204 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 ZNF497Q6ZNH5 498 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 C5orf30Q96GV9 206 aa17.87■□□□□ 0.45
USP48-205ENST00000421625 PINLYPA6NC86 204 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 LRRC30A6NM36 301 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 IRF2P14316 349 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 GDF1P27539 372 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 Q6ZWC4 215 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 ZNF808Q8N4W9 903 aaPredicted RBP17.86■□□□□ 0.45
USP48-205ENST00000421625 CMTM2Q8TAZ6 248 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 DTD1Q8TEA8 209 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 IMMP2LQ96T52 175 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 DLEU1O43261 78 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 SYNGR4O95473 234 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 OR2H2O95918 312 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 RPLP1P05386 114 aaKnown RBP17.86■□□□□ 0.45
USP48-205ENST00000421625 SOX8P57073 446 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 TMPRSS7Q7RTY8 843 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 TP53TG3Q9ULZ0 132 aa17.86■□□□□ 0.45
USP48-205ENST00000421625 S1PR2O95136 353 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 HNF1AP20823 631 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 NRN1LQ496H8 165 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 DOCK7Q96N67 2140 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 TMPRSS2O15393 492 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 P0C879 139 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 CD99P14209 185 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 EPHA8P29322 1005 aaPredicted RBP17.85■□□□□ 0.45
USP48-205ENST00000421625 MAFAQ8NHW3 353 aaPredicted RBP17.85■□□□□ 0.45
USP48-205ENST00000421625 TMEM45BQ96B21 275 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 POM121L2Q96KW2 1035 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 TMEM106BQ9NUM4 274 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 GOLT1BQ9Y3E0 138 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 BDP1A6H8Y1 2624 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 TRBV20OR9-2A0A075B6H5 130 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 IGHV3-64DA0A0J9YX35 117 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 YPEL1O60688 119 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 FOXL1Q12952 345 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 MOB1BQ7L9L4 216 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 TUSC5Q8IXB3 177 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 SFRP2Q96HF1 295 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 YPEL2Q96QA6 119 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 TMEM204Q9BSN7 226 aa17.85■□□□□ 0.45
USP48-205ENST00000421625 CCL4P13236 92 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 CD82P27701 267 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 LINC00310P59036 64 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 MSMO1Q15800 293 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 SPATA46Q5T0L3 261 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 LYSMD4Q5XG99 296 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 ALKBH2Q6NS38 261 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 OR2D2Q9H210 308 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 PDE6DO43924 150 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 Q8N7P7 452 aa17.84■□□□□ 0.45
USP48-205ENST00000421625 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.84■□□□□ 0.45
USP48-205ENST00000421625 OR5B21A6NL26 309 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 RNF212BA8MTL3 300 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 CDKN1AP38936 164 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 ZXDAP98168 799 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 OR2Y1Q8NGV0 311 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 ZDHHC11Q9H8X9 412 aa17.83■□□□□ 0.45
USP48-205ENST00000421625 GPR179Q6PRD1 2367 aa17.83■□□□□ 0.44
USP48-205ENST00000421625 GFRA1P56159 465 aa17.83■□□□□ 0.44
USP48-205ENST00000421625 BRWD1-AS2P59051 145 aa17.83■□□□□ 0.44
USP48-205ENST00000421625 TPTE2P1Q5T6R2 138 aa17.83■□□□□ 0.44
USP48-205ENST00000421625 C17orf98A8MV24 154 aa17.82■□□□□ 0.44
USP48-205ENST00000421625 CBLN1P23435 193 aa17.82■□□□□ 0.44
USP48-205ENST00000421625 UBE2NP61088 152 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms