RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SLC25A42Q86VD7 318 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 ZNF431Q8TF32 576 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-203ENST00000415600 RPEQ96AT9 228 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 R3HDM4Q96D70 268 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 WNT10AQ9GZT5 417 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 ZNF286AQ9HBT8 521 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 SDCBPO00560 298 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-203ENST00000415600 FAM106CPP0CH98 169 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 CD28P10747 220 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 TPTE2P1Q5T6R2 138 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 Q6ZS49 121 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 MARCH1Q8TCQ1 289 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 SCGB3A2Q96PL1 93 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 SLC25A33Q9BSK2 321 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 KIF25Q9UIL4 384 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 GPR132Q9UNW8 380 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 FAM172BPA6NC97 362 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 NAPSAO96009 420 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 NKX2-5P52952 324 aaPredicted RBP16.37■□□□□ 0.21
PTPRU-203ENST00000415600 TAS2R31P59538 309 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 PAX5Q02548 391 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 Q6ZPA2 131 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 REC114Q7Z4M0 266 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 CENPVQ7Z7K6 275 aaPredicted RBP16.37■□□□□ 0.21
PTPRU-203ENST00000415600 SUMF2Q8NBJ7 301 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 OR10A7Q8NGE5 316 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 RBM14Q96PK6 669 aaKnown RBP16.37■□□□□ 0.21
PTPRU-203ENST00000415600 NECAP2Q9NVZ3 263 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 CALYQ9NYX4 217 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 MGAT4CQ9UBM8 478 aa16.37■□□□□ 0.21
PTPRU-203ENST00000415600 ECI1P42126 302 aa16.36■□□□□ 0.21
PTPRU-203ENST00000415600 SURF2Q15527 256 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-203ENST00000415600 AADACL3Q5VUY0 350 aa16.36■□□□□ 0.21
PTPRU-203ENST00000415600 OR5AU1Q8NGC0 362 aa16.36■□□□□ 0.21
PTPRU-203ENST00000415600 TOMM40LQ969M1 308 aa16.36■□□□□ 0.21
PTPRU-203ENST00000415600 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
PTPRU-203ENST00000415600 CITED2Q99967 270 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-203ENST00000415600 ZNF436Q9C0F3 470 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-203ENST00000415600 RIMS4Q9H426 269 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-203ENST00000415600 TRAV24A0A0B4J272 114 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 ZBTB25P24278 435 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 UBE2MP61081 183 aaKnown RBP16.35■□□□□ 0.21
PTPRU-203ENST00000415600 C17orf58Q2M2W7 97 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
PTPRU-203ENST00000415600 LYG1Q8N1E2 194 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 OR2AK2Q8NG84 335 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 OR4X2Q8NGF9 303 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 NEK7Q8TDX7 302 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 DPCDQ9BVM2 203 aaPredicted RBP16.35■□□□□ 0.21
PTPRU-203ENST00000415600 CHMP1AQ9HD42 196 aaPredicted RBP16.35■□□□□ 0.21
PTPRU-203ENST00000415600 IDI2-AS1Q9NZ38 188 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 NOTCH3Q9UM47 2321 aa16.35■□□□□ 0.21
PTPRU-203ENST00000415600 TRBV6-6A0A0A6YYG2 114 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 FABP7O15540 132 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 DHRS2Q13268 280 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 LYG2Q86SG7 212 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 WIPF2Q8TF74 440 aaPredicted RBP16.34■□□□□ 0.21
PTPRU-203ENST00000415600 LINC00574Q9H8X3 128 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 Q9N2K0 584 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 RAB9BQ9NP90 201 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 OR5H14A6NHG9 310 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 G3V4G9 280 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 J3QR06 171 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 OR5H8P0DN80 308 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 PF4V1P10720 104 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 GZMHP20718 246 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 CD24P25063 80 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 RAB7AP51149 207 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 DHODHQ02127 395 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 ABCA11PQ4W5N1 156 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 SAMD5Q5TGI4 173 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 DHRS11Q6UWP2 260 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 THNSL2Q86YJ6 484 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 C12orf45Q8N5I9 185 aaPredicted RBP16.34■□□□□ 0.21
PTPRU-203ENST00000415600 ADAD2Q8NCV1 583 aaKnown RBP16.34■□□□□ 0.21
PTPRU-203ENST00000415600 OR13A1Q8NGR1 328 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 OR10X1Q8NGY0 326 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 ZNF486Q96H40 463 aaPredicted RBP16.34■□□□□ 0.21
PTPRU-203ENST00000415600 C5orf66Q9H5L9 145 aa16.34■□□□□ 0.21
PTPRU-203ENST00000415600 TMEM30CPA0ZSE6 113 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 LY6LH3BQJ8 138 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 HLA-AP01891 365 aaKnown RBP16.33■□□□□ 0.2
PTPRU-203ENST00000415600 PPP1R1AQ13522 171 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 BEAN1Q3B7T3 259 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 KPRPQ5T749 579 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-203ENST00000415600 MRPL30Q8TCC3 161 aaKnown RBP16.33■□□□□ 0.2
PTPRU-203ENST00000415600 MRGPRDQ8TDS7 321 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 HYLS1Q96M11 299 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 ZNF2Q9BSG1 426 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-203ENST00000415600 MOB4Q9Y3A3 225 aa16.33■□□□□ 0.2
PTPRU-203ENST00000415600 C9orf170A2RU37 121 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 SMLR1H3BR10 107 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 OR2A4O95047 310 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 GIPP09681 153 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-203ENST00000415600 GSTT2P0CG29 244 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 CGB3P0DN86 165 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 CGB7P0DN87 165 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 TMEM95Q3KNT9 176 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 TMEM128Q5BJH2 165 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms