RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 EDA2RQ9HAV5 297 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 GREB1Q4ZG55 1949 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 ZSWIM8A7E2V4 1837 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 NTN3O00634 580 aaPredicted RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 RHBDL1O75783 438 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 OR2H2O95918 312 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MPV17LQ2QL34 196 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 LFNGQ8NES3 379 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 RNF138Q8WVD3 245 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM45BQ96B21 275 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 DAZAP1Q96EP5 407 aaKnown RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 TNFRSF19Q9NS68 423 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 HSF4Q9ULV5 492 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 TP53TG5Q9Y2B4 290 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MPC1Q9Y5U8 109 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 TRIOBPQ9H2D6 2365 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 PTPRDP23468 1912 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MAP1LC3B2A6NCE7 125 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 LINC01387J3KSC0 135 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 DANCRP0C864 163 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 GGNQ86UU5 652 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MRPL41Q8IXM3 137 aaKnown RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 OR5A2Q8NGI9 324 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 SNIP1Q8TAD8 396 aaKnown RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 MAP1LC3BQ9GZQ8 125 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 PRO1933Q9H354 126 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 A0A0G2JRQ6 117 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 A0A1W2PPV4 95 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 FOXI3A8MTJ6 420 aaPredicted RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 C10orf142B7Z368 130 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 FCGR3BO75015 233 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 SP9P0CG40 484 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 CD200P41217 278 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 UCP3P55916 312 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 DEFB109BQ30KR1 87 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF528Q3MIS6 628 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 PRAMEF5Q5TYX0 476 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 SCCPDHQ8NBX0 429 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 OR4A16Q8NH70 328 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 OR1L1Q8NH94 360 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 ATP5SQ99766 215 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 LRRK1Q38SD2 2015 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF503-AS2A6NEH8 195 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 OR4C46A6NHA9 309 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 COLCA2A8K830 154 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 CDS2O95674 445 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 KRASP01116 189 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 CLN8Q9UBY8 286 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 SERTM2A0A1B0GWG4 89 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 M0R1B8 84 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 CD40P25942 277 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 PPOXP50336 477 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 PPP1CBP62140 327 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 EIF3IQ13347 325 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF766Q5HY98 468 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF880Q6PDB4 577 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 PCGF1Q9BSM1 259 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR2D2Q9H210 308 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 GNG12Q9UBI6 72 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 C9orf172C9J069 976 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 J3KRW8 73 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 PITX3O75364 302 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 IL15RAQ13261 267 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 LILRA1O75019 489 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 SRP19P09132 144 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 LYL1P12980 280 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 GNB2P62879 340 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 MSMO1Q15800 293 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 CRIP3Q6Q6R5 217 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 H1FXQ92522 213 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 RBMXL1Q96E39 390 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OPN3Q9H1Y3 402 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 C21orf140B9A014 251 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 HAND1O96004 215 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 IL4P05112 153 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 FGF7P21781 194 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 TAS2R30P59541 319 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM178AQ8NBL3 297 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR13D1Q8NGV5 346 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 FGF23Q9GZV9 251 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF703Q9H7S9 590 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 SLC25A22Q9H936 323 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF391Q9UJN7 358 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 OR2W1Q9Y3N9 320 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 NYNRINQ9P2P1 1898 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 M0R1X1 148 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 WNT9BO14905 357 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ST8SIA5O15466 376 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 TRIAP1O43715 76 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF506Q5JVG8 444 aa4.2□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF705AQ6ZN79 300 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 RBMXL3Q8N7X1 1067 aaKnown RBP4.2□□□□□ -1.74
SMAD4-202ENST00000398417 DEFB124Q8NES8 71 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms