RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GAB2Q9UQC2 676 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 IGHV1-18A0A0C4DH31 117 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 FABP1P07148 127 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 MEOX2P50222 304 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 TNFRSF9Q07011 255 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 C15orf54Q8N8G6 183 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 OR10G4Q8NGN3 311 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 OR10G9Q8NGN4 311 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 OR10G7Q8NGN6 311 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 SSMEM1Q8WWF3 244 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 RND1Q92730 232 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 S1PR3Q99500 378 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 KIAA1456Q9P272 454 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 CLCF1Q9UBD9 225 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 TGIF2-C20orf24A0A0A6YYL0 155 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF891A8MT65 544 aaPredicted RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 IQCF6A8MYZ5 107 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 S100A2P29034 98 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 NCR3LG1Q68D85 454 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 WDR31Q8NA23 367 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 COQ2Q96H96 371 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 YLPM1P49750 1951 aaKnown RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 KIAA1549Q9HCM3 1950 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 OR8U8P0C7N1 319 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 SLC25A6P12236 298 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 PRB3Q04118 309 aaPredicted RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 TFF3Q07654 80 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 RCC1LQ96I51 464 aaKnown RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 DMXL1Q9Y485 3027 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 TMPRSS2O15393 492 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 ACTL6BO94805 426 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 GYPAP02724 150 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 REG1BP48304 166 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 TNFAIP6P98066 277 aaPredicted RBP8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 SPRNQ5BIV9 151 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 CCL17Q92583 94 aa8.75□□□□□ -1.01
CPSF1P1-201ENST00000397477 WNK2Q9Y3S1 2297 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 DUXBA0A1W2PPF3 345 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 TMEM210A6NLX4 147 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 MARCH11A6NNE9 402 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 K7EM74 188 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 FOXC1Q12948 553 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 HABP2Q14520 560 aaPredicted RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 ABHD12Q8N2K0 398 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF525Q8N782 197 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 TAF15Q92804 592 aaKnown RBP eCLIP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 STARD4Q96DR4 205 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 QTRT1Q9BXR0 403 aaKnown RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 TRAV38-1A0A0B4J264 116 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 LINC00473A8K010 186 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 PSMB3P49720 205 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 GCSAMLQ5JQS6 135 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 WDR25Q64LD2 544 aaPredicted RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 CD177Q8N6Q3 437 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 RALYQ9UKM9 306 aaKnown RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 TP53TG5Q9Y2B4 290 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 RPS23P62266 143 aaKnown RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 ICAM4Q14773 271 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF146Q15072 292 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 DUX4L9Q6RFH8 374 aaPredicted RBP8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 CABLES2Q9BTV7 478 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 HIPK2Q9H2X6 1198 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 RNF115Q9Y4L5 304 aa8.74□□□□□ -1.01
CPSF1P1-201ENST00000397477 PIGBOS1A0A0B4J2F0 54 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 PAGE4O60829 102 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 EDARADDQ8WWZ3 215 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNRD1Q9P1U0 126 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 TNCP24821 2201 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 A0A1W2PPQ1 181 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 LRRC30A6NM36 301 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 Q8NFD4 153 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 IL22RA2Q969J5 263 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 ARV1Q9H2C2 271 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 GCM1Q9NP62 436 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 DCAF16Q9NXF7 216 aa8.73□□□□□ -1.01
CPSF1P1-201ENST00000397477 BTBD17A6NE02 478 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 AQP7O14520 342 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 BCL2P10415 239 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 S100PP25815 95 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 FAM216BQ8N7L0 139 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 SNRNP40Q96DI7 357 aaKnown RBP8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 OR5B12Q96R08 314 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 ASCL3Q9NQ33 180 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 AHRRA9YTQ3 701 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 GALR2O43603 387 aaPredicted RBP8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 NDUFA2O43678 99 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 APELAP0DMC3 54 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 COX5AP20674 150 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 TNFSF4P23510 183 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 CHRNA7P36544 502 aa8.72□□□□□ -1.01
CPSF1P1-201ENST00000397477 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms