RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 USF3Q68DE3 2245 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PPIAL4DF5H284 164 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 RPP30P78346 268 aaKnown RBP13.4□□□□□ -0.26
SNX6-202ENST00000396526 GUK1Q16774 197 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 FAM53AQ6NSI3 398 aaPredicted RBP13.4□□□□□ -0.26
SNX6-202ENST00000396526 RAB39BQ96DA2 213 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 RBKSQ9H477 322 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PPIAL4AQ9Y536 164 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 SNCAP37840 140 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PRAMEF5Q5TYX0 476 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 OR4A16Q8NH70 328 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 GAFA1Q96PS6 74 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 GAL3ST2Q9H3Q3 398 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 IDI2-AS1Q9NZ38 188 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
SNX6-202ENST00000396526 CEP295Q9C0D2 2601 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 IFNA17P01571 189 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
SNX6-202ENST00000396526 SMDT1Q9H4I9 107 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 AKAP13Q12802 2813 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 CD5P06127 495 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 CHRNB4P30926 498 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 CA7P43166 264 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 LOXL3P58215 753 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
SNX6-202ENST00000396526 NCR3LG1Q68D85 454 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 OR4S2Q8NH73 311 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 DTD1Q8TEA8 209 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 PIEZO2Q9H5I5 2752 aa13.39□□□□□ -0.27
SNX6-202ENST00000396526 FAM90A9PA6NNJ1 464 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 LINC00473A8K010 186 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 CCL21O00585 134 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 C1QL1O75973 258 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 SFTA3P0C7M3 94 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 NQO2P16083 231 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 NCMAPQ5T1S8 102 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 OR10P1Q8NGE3 313 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 CCL17Q92583 94 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 SELLP14151 372 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 APOBEC3AP31941 199 aaPredicted RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 ID4P47928 161 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 THBS3P49746 956 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 MEF2CQ06413 473 aaPredicted RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 SLC38A11Q08AI6 406 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 ROS1P08922 2347 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 CGB3P0DN86 165 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 CGB7P0DN87 165 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 FHITP49789 147 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 PPT1P50897 306 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 MRPS11P82912 194 aaKnown RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 SRSF3P84103 164 aaKnown RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 OR8G2PQ6IF36 304 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 FAM216BQ8N7L0 139 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 ST6GALNAC3Q8NDV1 305 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 CORO2AQ92828 525 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
SNX6-202ENST00000396526 MGAQ8IWI9 3026 aa13.38□□□□□ -0.27
SNX6-202ENST00000396526 NDUFB3O43676 98 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 SERF2P84101 59 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 B9A039 149 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 C17orf58Q2M2W7 97 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 LRRC10Q5BKY1 277 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 C10orf91Q5T1B1 145 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 LYG1Q8N1E2 194 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
SNX6-202ENST00000396526 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 P0C879 139 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 RUNX1Q01196 453 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 OR10A7Q8NGE5 316 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 IFI27L2Q9H2X8 130 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 TMEM106BQ9NUM4 274 aa13.37□□□□□ -0.27
SNX6-202ENST00000396526 IGHV3-7P01780 117 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 RPL31P62899 125 aaKnown RBP13.36□□□□□ -0.27
SNX6-202ENST00000396526 ODF3L1Q8IXM7 274 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 PUSL1Q8N0Z8 303 aaKnown RBP13.36□□□□□ -0.27
SNX6-202ENST00000396526 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 SFT2D1Q8WV19 159 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 RBMXL1Q96E39 390 aaKnown RBP13.36□□□□□ -0.27
SNX6-202ENST00000396526 POLEQ07864 2286 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 FAM90A27PA6NNH2 459 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 SFTPCP11686 197 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 AIFM2Q9BRQ8 373 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 HIPK2Q9H2X6 1198 aa13.36□□□□□ -0.27
SNX6-202ENST00000396526 TLN1Q9Y490 2541 aaKnown RBP13.36□□□□□ -0.27
SNX6-202ENST00000396526 TMEM178BH3BS89 294 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 NDUFA2O43678 99 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 RPL39P5Q59GN2 51 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 ATRAIDQ6UW56 229 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 ZNF709Q8N972 641 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms