RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ZBTB25P24278 435 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 MAPK3P27361 379 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-202ENST00000393773 QRFPP83859 136 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 INSL4Q14641 139 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 C1orf100Q5SVJ3 147 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 LRRTM1Q86UE6 522 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 THRSPQ92748 146 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 AK3Q9UIJ7 227 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 IGKV1-6A0A0C4DH72 117 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 RBMY1BA6NDE4 496 aaKnown RBP11.61□□□□□ -0.55
CHMP3-202ENST00000393773 RBMY1EA6NEQ0 496 aaKnown RBP11.61□□□□□ -0.55
CHMP3-202ENST00000393773 TMEM14DPA8MWL7 114 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 RBMY1DP0C7P1 496 aaKnown RBP11.61□□□□□ -0.55
CHMP3-202ENST00000393773 CELP19835 753 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 CEACAM6P40199 344 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 MED21Q13503 144 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 RPEL1Q2QD12 228 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 RNLSQ5VYX0 342 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 PQLC1Q8N2U9 271 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 ZNF555Q8NEP9 628 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 NEURL2Q9BR09 285 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 SLC35D1Q9NTN3 355 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 COA4Q9NYJ1 87 aa11.61□□□□□ -0.55
CHMP3-202ENST00000393773 EFCAB10A6NFE3 127 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 FOXI3A8MTJ6 420 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-202ENST00000393773 BMPR1BO00238 502 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 CNIH1O95406 144 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 CD7P09564 240 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 SCTP09683 121 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 CD300EQ496F6 205 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-202ENST00000393773 DEFB125Q8N687 156 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 ADAD2Q8NCV1 583 aaKnown RBP11.6□□□□□ -0.55
CHMP3-202ENST00000393773 KCNG3Q8TAE7 436 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 GGHQ92820 318 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 USMG5Q96IX5 58 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 HARBI1Q96MB7 349 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 LPAR5Q9H1C0 372 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-202ENST00000393773 PLEKHJ1Q9NW61 149 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 ZNF221Q9UK13 617 aa11.6□□□□□ -0.55
CHMP3-202ENST00000393773 M0R1X1 148 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 TPPPO94811 219 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 LGALS7P47929 136 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 WNT4P56705 351 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-202ENST00000393773 PHYHIPQ92561 330 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 C5orf30Q96GV9 206 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 SRD5A3Q9H8P0 318 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 S100A14Q9HCY8 104 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 Q9N2K0 584 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 C12orf4Q9NQ89 552 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 ZNF230Q9UIE0 474 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-202ENST00000393773 MGAT4AQ9UM21 535 aa11.59□□□□□ -0.55
CHMP3-202ENST00000393773 ZNF785A8K8V0 405 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 MYL12BO14950 172 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 SOCS1O15524 211 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 AIREO43918 545 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 APELAP0DMC3 54 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 SRMP19623 302 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 EDN2P20800 178 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 TATDN3Q17R31 274 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 RBM48Q5RL73 367 aaKnown RBP11.58□□□□□ -0.56
CHMP3-202ENST00000393773 GLT8D1Q68CQ7 371 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 LAIR2Q6ISS4 152 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 RDH8Q9NYR8 311 aa11.58□□□□□ -0.56
CHMP3-202ENST00000393773 A0A0B4J203 849 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 BPNT1O95861 308 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 CD37P11049 281 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 ZNF45Q02386 682 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 EXOSC2Q13868 293 aaKnown RBP11.57□□□□□ -0.56
CHMP3-202ENST00000393773 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 SNAPC3Q92966 411 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 OR2D2Q9H210 308 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 AKIP1Q9NQ31 210 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 SLC2A8Q9NY64 477 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 HSF4Q9ULV5 492 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 DNAH6Q9C0G6 4158 aa11.57□□□□□ -0.56
CHMP3-202ENST00000393773 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 FAM223BA6NKX1 122 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
CHMP3-202ENST00000393773 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 TTC23Q5W5X9 447 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 FAM223AQ8IWN6 122 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 FAM89BQ8N5H3 189 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 OR6M1Q8NGM8 313 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 CYGBQ8WWM9 190 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 SRSF12Q8WXF0 261 aaKnown RBP11.56□□□□□ -0.56
CHMP3-202ENST00000393773 PHB2Q99623 299 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
CHMP3-202ENST00000393773 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.55□□□□□ -0.56
CHMP3-202ENST00000393773 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms