RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 OR3A1P47881 315 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 FAM180AQ6UWF9 173 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 MAFAQ8NHW3 353 aaPredicted RBP8.38□□□□□ -1.07
COL17A1-203ENST00000393211 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 CLN8Q9UBY8 286 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 WDR83OSQ9Y284 106 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 ARHGAP21Q5T5U3 1957 aa8.38□□□□□ -1.07
COL17A1-203ENST00000393211 SZT2Q5T011 3432 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 TRAV9-1A0A075B6T8 112 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 CDIPTO14735 213 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 ZNHIT1O43257 154 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 ZG16O60844 167 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 RAMP3O60896 148 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 S1PR2O95136 353 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 HBZP02008 142 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 CNN1P51911 297 aaKnown RBP8.37□□□□□ -1.07
COL17A1-203ENST00000393211 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
COL17A1-203ENST00000393211 ZXDAP98168 799 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 TGFBR3Q03167 851 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 SLC10A1Q14973 349 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 IQCJQ1A5X6 159 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 Q3ZCU0 254 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 TMEM144Q7Z5S9 345 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 NECAP1Q8NC96 275 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 CHD3Q12873 2000 aaKnown RBP8.37□□□□□ -1.07
COL17A1-203ENST00000393211 DOCK10Q96BY6 2186 aa8.37□□□□□ -1.07
COL17A1-203ENST00000393211 C17orf98A8MV24 154 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 SP1P08047 785 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 ADH4P08319 380 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 MEOX1P50221 254 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 TMPRSS3P57727 454 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 BRWD1-AS2P59051 145 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 RPL15P61313 204 aaKnown RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 HTD2P86397 168 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 TFF3Q07654 80 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 ZNF816Q0VGE8 651 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 HNF4GQ14541 408 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 P2RY6Q15077 328 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 DCAF10Q5QP82 559 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 SPATA46Q5T0L3 261 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 INO80CQ6PI98 192 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 LINC01551Q86U37 167 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 GBGT1Q8N5D6 347 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 OR52E5Q8NH55 327 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 C5orf30Q96GV9 206 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 GMPPAQ96IJ6 420 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 TMEM204Q9BSN7 226 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 ELOVL1Q9BW60 279 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 OR2J1Q9GZK6 312 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 CXXC4Q9H2H0 198 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 FUT9Q9Y231 359 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 FREM1Q5H8C1 2179 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 A0A1B0GV90 55 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 PSPNO60542 156 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 PDGFBP01127 241 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 FOSL1P15407 271 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 CD1BP29016 333 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 OPRK1P41145 380 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 SPCS3P61009 180 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 UBE2NP61088 152 aaKnown RBP8.36□□□□□ -1.07
COL17A1-203ENST00000393211 ESPL1Q14674 2120 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 MDS2Q8NDY4 140 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 OR52L2PQ8NGH6 319 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 SLC25A40Q8TBP6 338 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 HES7Q9BYE0 225 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 OR51B6Q9H340 312 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 PRO3102Q9H379 93 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 PXMP4Q9Y6I8 212 aa8.36□□□□□ -1.07
COL17A1-203ENST00000393211 SPTBN5Q9NRC6 3674 aaKnown RBP8.35□□□□□ -1.07
COL17A1-203ENST00000393211 A0A1W2PPV4 95 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 C15orf62A8K5M9 175 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 ST8SIA5O15466 376 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL17A1-203ENST00000393211 LAMTOR5O43504 91 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 HPRT1P00492 218 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 NPPCP23582 126 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 IL3RAP26951 378 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 PMP22Q01453 160 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 PSG7Q13046 419 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 RTP5Q14D33 572 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 ACP7Q6ZNF0 438 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
COL17A1-203ENST00000393211 Q8N7P7 452 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 UBALD1Q8TB05 177 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 COQ2Q96H96 371 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 C12orf49Q9H741 205 aa8.35□□□□□ -1.07
COL17A1-203ENST00000393211 EYSQ5T1H1 3165 aa8.34□□□□□ -1.07
COL17A1-203ENST00000393211 MARCH11A6NNE9 402 aa8.34□□□□□ -1.07
COL17A1-203ENST00000393211 ZNF705GA8MUZ8 300 aaPredicted RBP8.34□□□□□ -1.07
COL17A1-203ENST00000393211 C9orf172C9J069 976 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms