RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 WDR25Q64LD2 544 aaPredicted RBP16.07■□□□□ 0.16
CCDC50-202ENST00000392456 CRIP3Q6Q6R5 217 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 OR4S2Q8NH73 311 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 ELOVL5Q9NYP7 299 aa16.07■□□□□ 0.16
CCDC50-202ENST00000392456 MC5RP33032 325 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 FAM3BP58499 235 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 TMEM182Q6ZP80 229 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 Q6ZSR3 168 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 CXorf67Q86X51 503 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 MEGF11A6BM72 1044 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 CORTO00230 105 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 CD55P08174 381 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 CD33P20138 364 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 CNN1P51911 297 aaKnown RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 C1orf100Q5SVJ3 147 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 SP5Q6BEB4 398 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 GFRALQ6UXV0 394 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 HOGA1Q86XE5 327 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 HIPK2Q9H2X6 1198 aa16.06■□□□□ 0.16
CCDC50-202ENST00000392456 C14orf166Q9Y224 244 aaKnown RBP16.06■□□□□ 0.16
CCDC50-202ENST00000392456 DEDDO75618 318 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 AGFG2O95081 481 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 ZNF16P17020 682 aaPredicted RBP16.05■□□□□ 0.16
CCDC50-202ENST00000392456 COX5AP20674 150 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 PRRX1P54821 245 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 TGFBR3Q03167 851 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 VAMP3Q15836 100 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 Q6ZWC4 215 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 OR10G4Q8NGN3 311 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 PLK3Q9H4B4 646 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 UQCR10Q9UDW1 63 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 PROCRQ9UNN8 238 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 RCL1Q9Y2P8 373 aaKnown RBP16.05■□□□□ 0.16
CCDC50-202ENST00000392456 CADP27708 2225 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 A0A0A6YYH2 397 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 A6NJ64 397 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 RNF212BA8MTL3 300 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 GLI4P10075 376 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 CTRLP40313 264 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 UBE2NP61088 152 aaKnown RBP16.05■□□□□ 0.16
CCDC50-202ENST00000392456 ZNF474Q6S9Z5 364 aaPredicted RBP16.05■□□□□ 0.16
CCDC50-202ENST00000392456 TXN2Q99757 166 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 CRIM1Q9NZV1 1036 aa16.05■□□□□ 0.16
CCDC50-202ENST00000392456 hCG_38984A0A1B0GV85 526 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 OR5B21A6NL26 309 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 MMP9P14780 707 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 ZNF93P35789 620 aaPredicted RBP16.04■□□□□ 0.16
CCDC50-202ENST00000392456 PLP2Q04941 152 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 TMEM256Q8N2U0 113 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 WDR31Q8NA23 367 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 WIPI2Q9Y4P8 454 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 NUPR1O60356 82 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 TIMP3P35625 211 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 OR3A4PP47883 348 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 HNRNPA3P51991 378 aaKnown RBP16.04■□□□□ 0.16
CCDC50-202ENST00000392456 FAM90A2PQ658T7 463 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 SAXO1Q8IYX7 474 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 SSC4DQ8WTU2 575 aa16.04■□□□□ 0.16
CCDC50-202ENST00000392456 MRPL27Q9P0M9 148 aaKnown RBP16.04■□□□□ 0.16
CCDC50-202ENST00000392456 SUPT4H1P63272 117 aaKnown RBP16.03■□□□□ 0.16
CCDC50-202ENST00000392456 C1QL2Q7Z5L3 287 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 STXBP6Q8NFX7 210 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 OR4B1Q8NGF8 309 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 PIGTQ969N2 578 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 BET1LQ9NYM9 111 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 A0A1B0GV72 72 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 HRH1P35367 487 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 PTGER4P35408 488 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 SAMD13Q5VXD3 122 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 FAM46BQ96A09 425 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 PTX4Q96A99 478 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 CYYR1Q96J86 154 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 SDF2L1Q9HCN8 221 aa16.03■□□□□ 0.16
CCDC50-202ENST00000392456 GNRHRP30968 328 aa16.02■□□□□ 0.16
CCDC50-202ENST00000392456 ERVS71-1P61550 626 aa16.02■□□□□ 0.16
CCDC50-202ENST00000392456 C17orf78Q8N4C9 275 aa16.02■□□□□ 0.16
CCDC50-202ENST00000392456 SPSB4Q96A44 273 aa16.02■□□□□ 0.16
CCDC50-202ENST00000392456 C5orf66Q9H5L9 145 aa16.02■□□□□ 0.16
CCDC50-202ENST00000392456 A0A1W2PP11 408 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 PRRG2O14669 202 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 CTSDP07339 412 aaPredicted RBP16.02■□□□□ 0.15
CCDC50-202ENST00000392456 TUBG1P23258 451 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 HINT1P49773 126 aaPredicted RBP16.02■□□□□ 0.15
CCDC50-202ENST00000392456 UNC119Q13432 240 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 Q6ZN92 141 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 GVQW1Q8N7I0 195 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 VN1R17PQ8TDU5 208 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 NANOS1Q8WY41 292 aaKnown RBP16.02■□□□□ 0.15
CCDC50-202ENST00000392456 TUBD1Q9UJT1 453 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 GPR132Q9UNW8 380 aa16.02■□□□□ 0.15
CCDC50-202ENST00000392456 CDKN1AP38936 164 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 QRFPP83859 136 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 KISS1Q15726 138 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 SPATA46Q5T0L3 261 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF709Q8N972 641 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 PP6455Q8WZ26 134 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 C1orf147Q96MC9 270 aaPredicted RBP16.01■□□□□ 0.15
CCDC50-202ENST00000392456 REPIN1Q9BWE0 567 aaKnown RBP16.01■□□□□ 0.15
CCDC50-202ENST00000392456 ZNF835Q9Y2P0 537 aa16.01■□□□□ 0.15
CCDC50-202ENST00000392456 MRPS28Q9Y2Q9 187 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms