RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 Q6P435 159 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 Q6ZT83 130 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 CLEC18CQ8NCF0 446 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 LIN7CQ9NUP9 197 aaKnown RBP8.15□□□□□ -1.1
COL6A3-204ENST00000392003 OR1A1Q9P1Q5 309 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 IGHV3-64DA0A0J9YX35 117 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 RNF212BA8MTL3 300 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 IL6RP08887 468 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-204ENST00000392003 PF4V1P10720 104 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-204ENST00000392003 FHITP49789 147 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 FOXC1Q12948 553 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 ATP6V1FQ16864 119 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 AWAT1Q58HT5 328 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 ZNF705AQ6ZN79 300 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-204ENST00000392003 OR5R1Q8NH85 324 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 RAB40CQ96S21 281 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 FBXO7Q9Y3I1 522 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 PPP1R2P9O14990 202 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 ERVS71-1P61550 626 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF154Q13106 437 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 IGFBP7Q16270 282 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 SCGB1C1Q8TD33 95 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 GPR146Q96CH1 333 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 CLCF1Q9UBD9 225 aa8.15□□□□□ -1.11
COL6A3-204ENST00000392003 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 IQCF6A8MYZ5 107 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 NPIPB11E5RHQ5 1161 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 C3orf80F5H4A9 247 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 K7EP13 123 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BKO60814 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 WDR1O75083 606 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 IGHG3P01860 377 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BJP06899 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 PGA5P0DJD9 388 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 SLC25A6P12236 298 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BOP23527 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BBP33778 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BDP58876 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BCP62807 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST2H2BEQ16778 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.14□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF497Q6ZNH5 498 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 PLPPR1Q8TBJ4 325 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BHQ93079 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BNQ99877 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BMQ99879 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 TMEM30CPA0ZSE6 113 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 TIMM8AO60220 97 aaPredicted RBP8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HAND1O96004 215 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 GCH1P30793 250 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 SELENOTP62341 195 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 PSG7Q13046 419 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 UBALD1Q8TB05 177 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 NINJ1Q92982 152 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
COL6A3-204ENST00000392003 MED19A0JLT2 244 aaPredicted RBP8.13□□□□□ -1.11
COL6A3-204ENST00000392003 XKRY2A2RUG3 117 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 PROB1E7EW31 1015 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 K7N7A8 449 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 PRRX1P54821 245 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 C4orf17Q53FE4 359 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 KLF14Q8TD94 323 aaPredicted RBP8.13□□□□□ -1.11
COL6A3-204ENST00000392003 LSM10Q969L4 123 aaKnown RBP8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ATP5SQ99766 215 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 SLC35B3Q9H1N7 401 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 CACNG5Q9UF02 275 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 SMCO3A2RU48 225 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ERVK11-1P61568 191 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF146Q15072 292 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ALKBH6Q3KRA9 238 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 WDR86Q86TI4 376 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 MYPOPQ86VE0 399 aaPredicted RBP8.13□□□□□ -1.11
COL6A3-204ENST00000392003 CXXC4Q9H2H0 198 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 H3BP45 60 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 AGFG2O95081 481 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 HBE1P02100 147 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 PPP1CCP36873 323 aaKnown RBP8.13□□□□□ -1.11
COL6A3-204ENST00000392003 NBL1P41271 181 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF718Q3SXZ3 478 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 SOHLH1Q5JUK2 328 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 OR8G5Q8NG78 346 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 RFNGQ9Y644 331 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
COL6A3-204ENST00000392003 SYNGR2O43760 224 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 MC5RP33032 325 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 SULT1A1P50225 295 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 GALMQ96C23 342 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 PROCRQ9UNN8 238 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 MED12LQ86YW9 2145 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 OR13C7P0DN81 318 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 MPV17P39210 176 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 RAB7AP51149 207 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 MZT1Q08AG7 82 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 LDLRAD2Q5SZI1 272 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms