RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CXorf1O96002 111 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 RANP62826 216 aaKnown RBP12.56□□□□□ -0.4
NDC1-201ENST00000371429 UNC119Q13432 240 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 UNQ9370/PRO34162Q6UXP9 181 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
NDC1-201ENST00000371429 NRIP2Q9BQI9 281 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 KRTDAPP60985 99 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 SNRNP40Q96DI7 357 aaKnown RBP12.56□□□□□ -0.4
NDC1-201ENST00000371429 SLC25A38Q96DW6 304 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
NDC1-201ENST00000371429 C17orf100A8MU93 164 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 PAGE4O60829 102 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 PMCHP20382 165 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 HSPE1P61604 102 aaKnown RBP12.56□□□□□ -0.4
NDC1-201ENST00000371429 ABLIM2Q6H8Q1 611 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 SLC35E4Q6ICL7 350 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
NDC1-201ENST00000371429 KIAA1324LA8MWY0 1029 aaPredicted RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 COMPP49747 757 aaPredicted RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 MFAP4P55083 255 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 ACP7Q6ZNF0 438 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 SS18L1O75177 396 aaPredicted RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 RND2P52198 227 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 LAMTOR1Q6IAA8 161 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 FAM216BQ8N7L0 139 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 TCAPO15273 167 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 CELA3BP08861 270 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 SNRPCP09234 159 aaKnown RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 LINC00869P0C866 280 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 HELTA6NFD8 242 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 MARCH11A6NNE9 402 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 BMPR1BO00238 502 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 TCL1AP56279 114 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 TMEM255AQ5JRV8 349 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 C16orf92Q96LL3 132 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 QTRT1Q9BXR0 403 aaKnown RBP12.55□□□□□ -0.4
NDC1-201ENST00000371429 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
NDC1-201ENST00000371429 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 ATP6V0CP27449 155 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 TM4SF20Q53R12 229 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 OR11H7Q8NGC8 314 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 TMEM14DPA8MWL7 114 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 PINLYPA6NC86 204 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 ZG16O60844 167 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 RHBDL1O75783 438 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 NHLH2Q02577 135 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 FAM216AQ8WUB2 273 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 SRD5A3Q9H8P0 318 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 PI4KAP42356 2102 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 PF4P02776 101 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 ZNF137PP52743 207 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 FXYD3Q14802 87 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 LURAP1Q96LR2 239 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
NDC1-201ENST00000371429 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
NDC1-201ENST00000371429 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 KBTBD11O94819 623 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 SUMO1P63165 101 aaKnown RBP12.53□□□□□ -0.4
NDC1-201ENST00000371429 TMEM252Q8N6L7 170 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 ST6GAL2Q96JF0 529 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 SPRR3Q9UBC9 169 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 ATP5G2Q06055 141 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 RGS13O14921 159 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 SNCGO76070 127 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
NDC1-201ENST00000371429 RALGAPA1Q6GYQ0 2036 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 GREB1Q4ZG55 1949 aa12.53□□□□□ -0.4
NDC1-201ENST00000371429 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
NDC1-201ENST00000371429 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 ADAM11O75078 769 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 MPDU1O75352 247 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 GPR146Q96CH1 333 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 RBKSQ9H477 322 aa12.52□□□□□ -0.4
NDC1-201ENST00000371429 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 SRSF10O75494 262 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms