RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RAB24Q969Q5 203 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 NPVFQ9HCQ7 196 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 MED13LQ71F56 2210 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 SERTM2A0A1B0GWG4 89 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 ZNF716A6NP11 495 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 PPIHO43447 177 aaKnown RBP13.93□□□□□ -0.18
SCAF1-201ENST00000360565 CYB5R3P00387 301 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-201ENST00000360565 FGFBP3Q8TAT2 258 aa13.93□□□□□ -0.18
SCAF1-201ENST00000360565 FLYWCH2Q96CP2 140 aaKnown RBP13.93□□□□□ -0.18
SCAF1-201ENST00000360565 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SSTR5P35346 364 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 RTN4RL2Q86UN3 420 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SMIM8Q96KF7 97 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 LOC105371267A0A1B0GV96 52 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 A0A1W2PRD5 423 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 A0A1W2PRF3 423 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 A0A1W2PRM7 423 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 NDUFB4O95168 129 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 CLEC3BP05452 202 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 MPZP25189 248 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 LSM10Q969L4 123 aaKnown RBP13.92□□□□□ -0.18
SCAF1-201ENST00000360565 WBP1Q96G27 269 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 DNASE2O00115 360 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-201ENST00000360565 PTBP3O95758 552 aaKnown RBP13.92□□□□□ -0.18
SCAF1-201ENST00000360565 CXorf1O96002 111 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SPCS3P61009 180 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 RPEL1Q2QD12 228 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SPNS3Q6ZMD2 512 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 VAMP8Q9BV40 100 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 SEBOXQ9HB31 216 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-201ENST00000360565 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 PXMP4Q9Y6I8 212 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 BDP1A6H8Y1 2624 aa13.92□□□□□ -0.18
SCAF1-201ENST00000360565 APELAP0DMC3 54 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 AMTP48728 403 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 LINC00518Q8N0U6 118 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 TCTEX1D1Q8N7M0 179 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 OR1L4Q8NGR5 311 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 PARD6AQ9NPB6 346 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 SNRPCP09234 159 aaKnown RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 PRRX1P54821 245 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 SRSF3P84103 164 aaKnown RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 ZFP36L1Q07352 338 aaKnown RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 ABLIM2Q6H8Q1 611 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 FDCSPQ8NFU4 85 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 OR2T6Q8NHC8 308 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 CD3EP07766 207 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 RPL29P47914 159 aaKnown RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 BCL2L2Q92843 193 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 HELTA6NFD8 242 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 PTGDSP41222 190 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 OR1B1Q8NGR6 318 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 OR1L8Q8NGR8 309 aa13.91□□□□□ -0.18
SCAF1-201ENST00000360565 BARX1Q9HBU1 254 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-201ENST00000360565 IGKV1D-13A0A0B4J2D9 117 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 IGKV1-12A0A0C4DH73 117 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 FAM157AC9JC47 383 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 WISP1O95388 367 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 IGKV1D-12P01611 117 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 PGA5P0DJD9 388 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 IGKV1-13P0DP09 117 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 GNB2P62879 340 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 SUPT4H1P63272 117 aaKnown RBP13.9□□□□□ -0.18
SCAF1-201ENST00000360565 NRN1LQ496H8 165 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 PAX6P26367 422 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 MIC13Q5XKP0 118 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 Q6ZT83 130 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 ZNF383Q8NA42 475 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 ZNF524Q96C55 264 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 ZNF253O75346 499 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 WDR25Q64LD2 544 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-201ENST00000360565 C1orf174Q8IYL3 243 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 NABP1Q96AH0 204 aa13.9□□□□□ -0.18
SCAF1-201ENST00000360565 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-201ENST00000360565 FOXD3Q9UJU5 478 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-201ENST00000360565 A0A087X0M5 115 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 A0A1B0GX30 115 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 F8VVB4 439 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 F8VWA3 439 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 MMP7P09237 267 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 CRYGSP22914 178 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 OR5I1Q13606 314 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 MRPL54Q6P161 138 aaKnown RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 LHFPL1Q86WI0 220 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 ARL2-SNX15V9GYD0 113 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 C12orf77C9JDV5 145 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 SRSF10O75494 262 aaKnown RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 FOXG1P55316 489 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 LYZP61626 148 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 NOL4LQ96MY1 436 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms