RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TMEM14EPQ6UXP3 125 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 C5orf30Q96GV9 206 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 ACY3Q96HD9 319 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 TECTBQ96PL2 329 aa8.53□□□□□ -1.04
PTPRA-203ENST00000356147 NCOR1O75376 2440 aa8.52□□□□□ -1.04
PTPRA-203ENST00000356147 PATE3B3GLJ2 98 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 M0R143 59 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 NPSP0C0P6 89 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 ADMP35318 185 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 RIPPLY2Q5TAB7 128 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 TGIF2LYQ8IUE0 185 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-203ENST00000356147 WDYHV1Q96HA8 205 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 NPCDR1Q9BY65 106 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 LIN7CQ9NUP9 197 aaKnown RBP8.52□□□□□ -1.05
PTPRA-203ENST00000356147 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 PPIAL4AQ9Y536 164 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 TRIOBPQ9H2D6 2365 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 SLC17A3O00476 420 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
PTPRA-203ENST00000356147 MT-CO3P00414 261 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 TFPI2P48307 235 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 ERVFC1-1P60608 527 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 PPP1CBP62140 327 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 WDR86Q86TI4 376 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 BEND2Q8NDZ0 799 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 OR10P1Q8NGE3 313 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 AGMATQ9BSE5 352 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 GPR179Q6PRD1 2367 aa8.52□□□□□ -1.05
PTPRA-203ENST00000356147 TRBV20OR9-2A0A075B6H5 130 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 WNT9BO14905 357 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 IRF2P14316 349 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 COX5AP20674 150 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 CDKN1AP38936 164 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 FOLR3P41439 243 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 GNG3P63215 75 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 AESQ08117 197 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 Q6P435 159 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF826PQ6ZT77 177 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 OR2Y1Q8NGV0 311 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 DTD1Q8TEA8 209 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM68Q96MH6 324 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 NXPH2O95156 264 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 SLC25A6P12236 298 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 PDLIM4P50479 330 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 TDGF1P3P51864 188 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ACOT6Q3I5F7 207 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 LBHQ53QV2 105 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ASPHD1Q5U4P2 390 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 SAP25Q8TEE9 199 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 KCNE4Q8WWG9 221 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 FAM103A1Q9BTL3 118 aaKnown RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 TMEM147Q9BVK8 224 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 PSPNO60542 156 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 HPRT1P00492 218 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 CELA3BP08861 270 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 SLC35B1P78383 322 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 NUFIP2Q7Z417 695 aaKnown RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ZNF573Q86YE8 665 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 VKORC1L1Q8N0U8 176 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 VN1R17PQ8TDU5 208 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 POM121L2Q96KW2 1035 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 RIMS4Q9H426 269 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-203ENST00000356147 ZDHHC11Q9H8X9 412 aa8.51□□□□□ -1.05
PTPRA-203ENST00000356147 SERPINA7P05543 415 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 BRWD1-AS2P59051 145 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 RPL15P61313 204 aaKnown RBP8.5□□□□□ -1.05
PTPRA-203ENST00000356147 SRSF7Q16629 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPRA-203ENST00000356147 SAXO1Q8IYX7 474 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 MRGPRDQ8TDS7 321 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 DCTN5Q9BTE1 182 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 WDR54Q9H977 334 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 PARD6AQ9NPB6 346 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 MED13Q9UHV7 2174 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 MAP1BP46821 2468 aaKnown RBP8.5□□□□□ -1.05
PTPRA-203ENST00000356147 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 LRRC30A6NM36 301 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 PMS2P5A8MQ11 134 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 CD82P27701 267 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 PLP2Q04941 152 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 Q6ZWC4 215 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 CENPVQ7Z7K6 275 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-203ENST00000356147 CFAP47Q6ZTR5 3102 aa8.5□□□□□ -1.05
PTPRA-203ENST00000356147 MAGEA5P43359 124 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 CYB561P49447 251 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 RAB4BP61018 213 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 HLA-DRB5Q30154 266 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 C1orf194Q5T5A4 169 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 SCCPDHQ8NBX0 429 aa8.49□□□□□ -1.05
PTPRA-203ENST00000356147 CMTM2Q8TAZ6 248 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms