RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OCC1Q8TAD7 63 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
RTN3-205ENST00000356000 SYNGR2O43760 224 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 NUDT14O95848 222 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 SRIP30626 198 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 UBE2G1P62253 170 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 RPEL1Q2QD12 228 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 COX19Q49B96 90 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 TCTEX1D4Q5JR98 221 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 ZNF818PQ6ZRF7 136 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
RTN3-205ENST00000356000 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
RTN3-205ENST00000356000 WISP1O95388 367 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 SRFP11831 508 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 MRPL54Q6P161 138 aaKnown RBP13.3□□□□□ -0.28
RTN3-205ENST00000356000 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 NPFFR1Q9GZQ6 430 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 SLC7A10Q9NS82 523 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 ADAMTS9Q9P2N4 1935 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 A0A1W2PR80 420 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 IGHG1P01857 330 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 IAPPP10997 89 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 SSTR5P35346 364 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 PLP1P60201 277 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 HTD2P86397 168 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 HSD52Q0P140 79 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 PSG7Q13046 419 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 OR8B8Q15620 311 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 ULBP2Q9BZM5 246 aa13.3□□□□□ -0.28
RTN3-205ENST00000356000 BMPR1BO00238 502 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 PGCP20142 388 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 OR1D4P47884 311 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
RTN3-205ENST00000356000 ZNF776Q68DI1 518 aaPredicted RBP13.29□□□□□ -0.28
RTN3-205ENST00000356000 GAPTQ8N292 157 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 IRF7Q92985 503 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 THYN1Q9P016 225 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 LRP5LA4QPB2 252 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 H0Y980 276 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 SERPINE2P07093 398 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 SLC38A11Q08AI6 406 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 GTF3C1Q12789 2109 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 Q6ZPA2 131 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 TIMM29Q9BSF4 260 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 MYO7BQ6PIF6 2116 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 TECTAO75443 2155 aa13.29□□□□□ -0.28
RTN3-205ENST00000356000 NPIPA5E9PKD4 350 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
RTN3-205ENST00000356000 COX5AP20674 150 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 CRYBB3P26998 211 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 PMP22Q01453 160 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 TMEM105Q8N8V8 129 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 OR2AE1Q8NHA4 323 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 NPIPA1Q9UND3 350 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 TGFBR3LH3BV60 316 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 PRKNO60260 465 aaPredicted RBP13.28□□□□□ -0.28
RTN3-205ENST00000356000 UTS2O95399 124 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 MRPL21Q7Z2W9 205 aaKnown RBP13.28□□□□□ -0.28
RTN3-205ENST00000356000 OR2Z1Q8NG97 314 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 OR4A5Q8NH83 315 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 PIGTQ969N2 578 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 HS3ST3A1Q9Y663 406 aa13.28□□□□□ -0.28
RTN3-205ENST00000356000 A0A0G2JMM0 328 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 A0A1W2PPB8 328 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 C9orf118A6NHY6 69 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 PRR19A6NJB7 356 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 KIR3DP1A8MWS1 328 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 TNFSF14O43557 240 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 REG1BP48304 166 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 BRICD5Q6PL45 260 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 FLVCR1-AS1Q8TAF5 88 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 JMJD8Q96S16 334 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 CCL26Q9Y258 94 aa13.27□□□□□ -0.28
RTN3-205ENST00000356000 SPTBN5Q9NRC6 3674 aaKnown RBP13.27□□□□□ -0.28
RTN3-205ENST00000356000 OR4C46A6NHA9 309 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 MS4A18H0YCH9 400 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 H0YGG7 62 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 IGLV3-1P01715 115 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 PTGDSP41222 190 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 DAP3P51398 398 aaKnown RBP13.27□□□□□ -0.29
RTN3-205ENST00000356000 SEC11AP67812 179 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 TMEM249Q2WGJ8 235 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 MS4A18Q3C1V0 323 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 Q6ZRM9 215 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 PP6455Q8WZ26 134 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 RDH5Q92781 318 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 LYZL4Q96KX0 146 aa13.27□□□□□ -0.29
RTN3-205ENST00000356000 TMED7-TICAM2A0A0A6YYA0 188 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 E9PLN8 166 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 K7EN84 100 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 CX3CL1P78423 397 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 PLCXD3Q63HM9 321 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms