RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 WNT5BQ9H1J7 359 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 FAM206AQ9NX38 181 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 IFITM10A6NMD0 228 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 NDUFB4O95168 129 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 SUCLG1P53597 346 aaKnown RBP15.47■□□□□ 0.07
COL18A1-202ENST00000355480 FAM53AQ6NSI3 398 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-202ENST00000355480 PNKDQ8N490 385 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 KCNE5Q9UJ90 142 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 UNC13CQ8NB66 2214 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 QSER1Q2KHR3 1735 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 OR2A4O95047 310 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 MIC13Q5XKP0 118 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 OR2A7Q96R45 310 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 REG1AP05451 166 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 CSRP2Q16527 193 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 PLXNB2O15031 1838 aa15.47■□□□□ 0.07
COL18A1-202ENST00000355480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.46■□□□□ 0.07
COL18A1-202ENST00000355480 B9A039 149 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 PPP1R32Q7Z5V6 425 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 DUX5Q96PT3 197 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 WFDC6Q9BQY6 131 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 JPT1Q9UK76 154 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 ICE1Q9Y2F5 2266 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 HLA-DQB1P01920 261 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 THY1P04216 161 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 TRAV30A0A087WSZ9 112 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 IGKV3D-11A0A0A0MRZ8 115 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 PF4P02776 101 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 IGKV3-11P04433 115 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 SMIM10L1P0DMW3 83 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 CXorf66Q5JRM2 361 aaPredicted RBP15.46■□□□□ 0.07
COL18A1-202ENST00000355480 SMIM10Q96HG1 83 aa15.46■□□□□ 0.07
COL18A1-202ENST00000355480 FOXH1O75593 365 aa15.46■□□□□ 0.06
COL18A1-202ENST00000355480 GLIPR1P48060 266 aa15.46■□□□□ 0.06
COL18A1-202ENST00000355480 DCAF12L2Q5VW00 463 aa15.46■□□□□ 0.06
COL18A1-202ENST00000355480 CYB561D1Q8N8Q1 229 aa15.46■□□□□ 0.06
COL18A1-202ENST00000355480 QTRT1Q9BXR0 403 aaKnown RBP15.46■□□□□ 0.06
COL18A1-202ENST00000355480 RALYQ9UKM9 306 aaKnown RBP15.46■□□□□ 0.06
COL18A1-202ENST00000355480 A6NDN8 102 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 RSPO4Q2I0M5 234 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-202ENST00000355480 IBA57Q5T440 356 aaKnown RBP15.45■□□□□ 0.06
COL18A1-202ENST00000355480 GPR146Q96CH1 333 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 GPHA2Q96T91 129 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 GPR132Q9UNW8 380 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 HSPE1P61604 102 aaKnown RBP15.45■□□□□ 0.06
COL18A1-202ENST00000355480 TUBD1Q9UJT1 453 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 ZFP30Q9Y2G7 519 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 IFI6P09912 130 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 NMUP48645 174 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 A1L4Q6 167 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 ZNF729A6NN14 1252 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-202ENST00000355480 RECKO95980 971 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 PLAURQ03405 335 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 SAXO1Q8IYX7 474 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 MEOX2P50222 304 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 OR4C13Q8NGP0 309 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 TMEM186Q96B77 213 aa15.45■□□□□ 0.06
COL18A1-202ENST00000355480 PTGDSP41222 190 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 COMPP49747 757 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-202ENST00000355480 C1orf100Q5SVJ3 147 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 DNM1P46Q6ZS02 220 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 PHLDA3Q9Y5J5 127 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 RP1P56715 2156 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 MARCH11A6NNE9 402 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 CKS2P33552 79 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 CD81P60033 236 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 VN1R17PQ8TDU5 208 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 FAM209AQ5JX71 171 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 LSM10Q969L4 123 aaKnown RBP15.44■□□□□ 0.06
COL18A1-202ENST00000355480 CABIN1Q9Y6J0 2220 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 PSG9Q00887 426 aa15.44■□□□□ 0.06
COL18A1-202ENST00000355480 FOXD3Q9UJU5 478 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-202ENST00000355480 SELENOHQ8IZQ5 122 aaKnown RBP15.44■□□□□ 0.06
COL18A1-202ENST00000355480 HERPUD1Q15011 391 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 Q6ZT83 130 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 PPP1R3EQ9H7J1 279 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 S1PR2O95136 353 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 STAG3L2P0CL84 134 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 FXYD3Q14802 87 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 ACSF3Q4G176 576 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-202ENST00000355480 TAF15Q92804 592 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL18A1-202ENST00000355480 SIAH2O43255 324 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 PQLC2Q6ZP29 291 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 CTHRC1Q96CG8 243 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 IGKV1D-42A0A075B6H8 117 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 GCM2O75603 506 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-202ENST00000355480 KBTBD11O94819 623 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 APOBEC3AP31941 199 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-202ENST00000355480 P2RY4P51582 365 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 CX3CL1P78423 397 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 AQP3Q92482 292 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 UBR3Q6ZT12 1888 aa15.43■□□□□ 0.06
COL18A1-202ENST00000355480 EEF1AKMT3Q96AZ1 226 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 DNAJC4Q9NNZ3 241 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
COL18A1-202ENST00000355480 NPIPB11E5RHQ5 1161 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 ZNF250P15622 560 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 SCARF2Q96GP6 870 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms