RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SLC45A2Q9UMX9 530 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 CHCHD2Q9Y6H1 151 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 TCAPO15273 167 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 HNRNPA3P51991 378 aaKnown RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF596Q8TC21 504 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 AKIRIN1Q9H9L7 192 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 ARHGEF17Q96PE2 2063 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 TANC1Q9C0D5 1861 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 IGKV1D-8A0A087WSZ0 117 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 LINC00587B1AMM8 73 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 M0R143 59 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 PDE6DO43924 150 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 CD81P60033 236 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF385CQ66K41 422 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 OR1L6Q8NGR2 347 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
COLCA1-201ENST00000355430 OR4C12Q96R67 309 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 KIF26BQ2KJY2 2108 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 IGLV3-12A0A075B6K2 115 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 OR2H2O95918 312 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 RIPPLY2Q5TAB7 128 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 HSD17B10Q99714 261 aaKnown RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 IL36GQ9NZH8 169 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TCL1AP56279 114 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 SLC35B1P78383 322 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 OR4P4Q8NGL7 312 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 GALNT14Q96FL9 552 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 DMRT1Q9Y5R6 373 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 PLXNB3Q9ULL4 1909 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 LOC102723971A0A1B0GUV8 181 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 HSBP1O75506 76 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 ACAA1P09110 424 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 RNF151Q2KHN1 245 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 ETFRF1Q6IPR1 90 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 OR2T6Q8NHC8 308 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 SEBOXQ9HB31 216 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 DLL3Q9NYJ7 618 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 IL19Q9UHD0 177 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF835Q9Y2P0 537 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 LOC102723996A0A087X1L8 192 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 FAM3BP58499 235 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 NEU4Q8WWR8 484 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 INSIG2Q9Y5U4 225 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 EP300Q09472 2414 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 FREM3P0C091 2139 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 CEBPDP49716 269 aaPredicted RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TGIF2LYQ8IUE0 185 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 ZBTB34Q8NCN2 500 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 OR1P1Q8NH06 330 aa10.51□□□□□ -0.73
COLCA1-201ENST00000355430 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 A0A1W2PN81 502 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 NAT2P11245 290 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 NFAM1Q8NET5 270 aaPredicted RBP10.5□□□□□ -0.73
COLCA1-201ENST00000355430 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 HAX1O00165 279 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 RNASEKQ6P5S7 137 aaKnown RBP10.5□□□□□ -0.73
COLCA1-201ENST00000355430 KLHDC1Q8N7A1 406 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 ABHD14AQ9BUJ0 271 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 WFDC1Q9HC57 220 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 SRP19P09132 144 aaKnown RBP10.5□□□□□ -0.73
COLCA1-201ENST00000355430 SUPT4H1P63272 117 aaKnown RBP10.5□□□□□ -0.73
COLCA1-201ENST00000355430 C18orf12Q96KH6 178 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 ACSF3Q4G176 576 aaPredicted RBP10.5□□□□□ -0.73
COLCA1-201ENST00000355430 PRDM14Q9GZV8 571 aa10.5□□□□□ -0.73
COLCA1-201ENST00000355430 CCL1P22362 96 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 PSG5Q15238 335 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 SLC25A53Q5H9E4 307 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 CALHM1Q8IU99 346 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 P2RX4Q99571 388 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 IGHV3OR15-7A0A075B7D8 119 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 FAM168AQ92567 244 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 MRPS18CQ9Y3D5 142 aaKnown RBP10.49□□□□□ -0.73
COLCA1-201ENST00000355430 SRSF10O75494 262 aaKnown RBP10.49□□□□□ -0.73
COLCA1-201ENST00000355430 OR10J1P30954 320 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 NDUFB4O95168 129 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 DDTP30046 118 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 IER3P46695 156 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 COL10A1Q03692 680 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 OR1L1Q8NH94 360 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 COA4Q9NYJ1 87 aa10.49□□□□□ -0.73
COLCA1-201ENST00000355430 THADAQ6YHU6 1953 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms