RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 H3BTX0 84 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 WNT9BO14905 357 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 PDLIM4P50479 330 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 P2RY4P51582 365 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 GDF15Q99988 308 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 KLRB1Q12918 225 aa11.33□□□□□ -0.6
SCN8A-202ENST00000355133 A0A087X0M5 115 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 A0A1B0GX30 115 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 SYNGR3O43761 229 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 IBA57Q5T440 356 aaKnown RBP11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM181AQ8N9Y4 354 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 AQP3Q92482 292 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 DCTN5Q9BTE1 182 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 A8MWL6 223 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 S1PR2O95136 353 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 RECKO95980 971 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 RFPL3SP0C7P2 107 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 CRYBA2P53672 197 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 SELENOTP62341 195 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 RSPO4Q2I0M5 234 aaPredicted RBP11.32□□□□□ -0.6
SCN8A-202ENST00000355133 FAM106AQ4KMX7 169 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 G6PC2Q9NQR9 355 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 A1L4Q6 167 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 ZG16O60844 167 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 THY1P04216 161 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 CELA3AP09093 270 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
SCN8A-202ENST00000355133 RELBQ01201 579 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 SIGLEC12Q96PQ1 595 aa11.32□□□□□ -0.6
SCN8A-202ENST00000355133 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 TUBD1Q9UJT1 453 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 TRBV5-7A0A0A0MS05 114 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 MPDU1O75352 247 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 ACSF3Q4G176 576 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 LAMTOR1Q6IAA8 161 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF383Q8NA42 475 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 RAB24Q969Q5 203 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 PITPNC1Q9UKF7 332 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 FAM53AQ6NSI3 398 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 CENPVQ7Z7K6 275 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 CD74P04233 296 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 IFITM3Q01628 133 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 CTHRC1Q96CG8 243 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 PGLYRP4Q96LB8 373 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 CKS2P33552 79 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 PLAURQ03405 335 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
SCN8A-202ENST00000355133 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 HKR1P10072 659 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 SMAGPQ0VAQ4 97 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 CHAC2Q8WUX2 184 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 QTRT1Q9BXR0 403 aaKnown RBP11.3□□□□□ -0.6
SCN8A-202ENST00000355133 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
SCN8A-202ENST00000355133 MARF1Q9Y4F3 1742 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms