RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 NPVFQ9HCQ7 196 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PRR13Q9NZ81 148 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 COL11A1P12107 1806 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 MVDP53602 400 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
NIPBL-201ENST00000282516 PRR35P0CG20 571 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 ARL14EPLP0DKL9 152 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 AICDAQ9GZX7 198 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 C16orf97H3BN30 126 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 MAFAQ8NHW3 353 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-201ENST00000282516 ST6GAL2Q96JF0 529 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 OR51M1Q9H341 326 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 RBKSQ9H477 322 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 KIR3DL3Q8N743 410 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 RHOVQ96L33 236 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-201ENST00000282516 RBM11P57052 281 aaKnown RBP7.6□□□□□ -1.19
NIPBL-201ENST00000282516 HBBP68871 147 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 C10orf111Q8N326 155 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 SRSF5Q13243 272 aaKnown RBP7.6□□□□□ -1.19
NIPBL-201ENST00000282516 INSL4Q14641 139 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 METTL12A8MUP2 240 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 ATP5LO75964 103 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 RPS11P62280 158 aaKnown RBP eCLIP7.6□□□□□ -1.19
NIPBL-201ENST00000282516 FAM71F2Q6NXP2 309 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 OR2Y1Q8NGV0 311 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 DNASE2BQ8WZ79 361 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM222Q9H0R3 208 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM50AO95807 157 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 THADAQ6YHU6 1953 aa7.6□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM170BQ5T4T1 132 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 SAMD13Q5VXD3 122 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 C21orf140B9A014 251 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 CXorf66Q5JRM2 361 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 DMKNQ6E0U4 476 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 CT55Q8WUE5 264 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 CISD1Q9NZ45 108 aaKnown RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 TNFSF14O43557 240 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 COL10A1Q03692 680 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 PLSCR2Q9NRY7 297 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 SLC17A3O00476 420 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 RRHO14718 337 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 HOGA1Q86XE5 327 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ADAD2Q8NCV1 583 aaKnown RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 MRPL32Q9BYC8 188 aaKnown RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 NPFFR1Q9GZQ6 430 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 CGB1A6NKQ9 187 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF205O95201 554 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 REG1BP48304 166 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF645Q8N7E2 425 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 MS4A4AQ96JQ5 239 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 RCC1P18754 421 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 FOXJ2Q9P0K8 574 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 SPCS1Q9Y6A9 102 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1B0GW15 77 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1W2PQD3 144 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 TCRBV5S1A1TA0A578 114 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 TRIP6Q15654 476 aaKnown RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 RSPO2Q6UXX9 243 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ASAH2BP0C7U1 165 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF658BQ4V348 819 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 SPINK14Q6IE38 97 aa7.59□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF71Q9NQZ8 489 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-201ENST00000282516 HOXA3O43365 443 aaPredicted RBP7.59□□□□□ -1.2
NIPBL-201ENST00000282516 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.2
NIPBL-201ENST00000282516 TRBV20OR9-2A0A075B6H5 130 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TRAV21A0A0B4J279 112 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 C19orf67A6NJJ6 358 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 MUC1P15941 1255 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CA7P43166 264 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 GPR6P46095 362 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 DMRT1Q9Y5R6 373 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 PRSS12P56730 875 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 GUSBP11Q6P575 273 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 SOCS1O15524 211 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 OGG1O15527 345 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TRGC2P03986 189 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 PLAUP00749 431 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 COX6B1P14854 86 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 FAM209AQ5JX71 171 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 FAM159AQ6UWV7 190 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 DCTN5Q9BTE1 182 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 RTN4RQ9BZR6 473 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 KLK2P20151 261 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 MALP21145 153 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 HIKESHIQ53FT3 197 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM160Q9NX00 188 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TNCP24821 2201 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A26D6RGX4 464 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CA1P00915 261 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CRPP02741 224 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 MESTQ5EB52 335 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms