RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 TIMD4Q96H15 378 aa7.55□□□□□ -1.2
SEC16A-201ENST00000277537 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
SEC16A-201ENST00000277537 ZDHHC8Q9ULC8 765 aa7.55□□□□□ -1.2
SEC16A-201ENST00000277537 FOXI3A8MTJ6 420 aaPredicted RBP7.54□□□□□ -1.2
SEC16A-201ENST00000277537 RAMP3O60896 148 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 STUMQ69YW2 141 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 HSD17B10Q99714 261 aaKnown RBP7.54□□□□□ -1.2
SEC16A-201ENST00000277537 ABHD14AQ9BUJ0 271 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 GCM1Q9NP62 436 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 IGSF23A1L1A6 192 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 LY86O95711 162 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 HBE1P02100 147 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
SEC16A-201ENST00000277537 KITLGP21583 273 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 NHLH1Q02575 133 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 KLRB1Q12918 225 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 CD177Q8N6Q3 437 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 WFIKKN1Q96NZ8 548 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 CIB3Q96Q77 187 aaPredicted RBP7.54□□□□□ -1.2
SEC16A-201ENST00000277537 DMRTA2Q96SC8 542 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 UNKLQ9H9P5 680 aaKnown RBP7.54□□□□□ -1.2
SEC16A-201ENST00000277537 SLC35D1Q9NTN3 355 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 UQCC1Q9NVA1 299 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 IGHV3-72A0A0B4J1Y9 119 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 IGHV1-46P01743 117 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 APELAP0DMC3 54 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 MEOX2P50222 304 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 SULT1A1P50225 295 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 RAB7AP51149 207 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 MOB3BQ86TA1 216 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 GCSAMQ8N6F7 178 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 DCAF16Q9NXF7 216 aa7.54□□□□□ -1.2
SEC16A-201ENST00000277537 K7ENP7 123 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 IFNL4K9M1U5 179 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 FGF2P09038 288 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 NDUFA6P56556 154 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 C9orf152Q5JTZ5 239 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 NCR3LG1Q68D85 454 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 FAM24BQ8N5W8 94 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 TMEM171Q8WVE6 324 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 NEUROG1Q92886 237 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 C18orf12Q96KH6 178 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 RHOVQ96L33 236 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ELOVL5Q9NYP7 299 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ANAPC10Q9UM13 185 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 MMP24Q9Y5R2 645 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ZNF292O60281 2723 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 MARCH11A6NNE9 402 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 NCMAPQ5T1S8 102 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 SAT2Q96F10 170 aaPredicted RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ATP5SQ99766 215 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 SLC25A22Q9H936 323 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 hCG_1809904A0A1W2PP81 198 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 A0A1W2PR64 198 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 A0A1W2PRV1 198 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 C17orf112F2Z3M2 114 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ZG16O60844 167 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 RAB5CP51148 216 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 RBMS3Q6XE24 437 aaKnown RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 IL34Q6ZMJ4 242 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ZBTB34Q8NCN2 500 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 OR4S2Q8NH73 311 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 COQ2Q96H96 371 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
SEC16A-201ENST00000277537 IL19Q9UHD0 177 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 TUBD1Q9UJT1 453 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 RFNGQ9Y644 331 aa7.53□□□□□ -1.2
SEC16A-201ENST00000277537 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
SEC16A-201ENST00000277537 A0A1W2PPE2 198 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 DPRXA6NFQ7 191 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 CEACAM18A8MTB9 384 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 C17orf100A8MU93 164 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 SRRM5B3KS81 715 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 DNASE2O00115 360 aaPredicted RBP7.52□□□□□ -1.21
SEC16A-201ENST00000277537 FABP1P07148 127 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
SEC16A-201ENST00000277537 MBNL2Q5VZF2 373 aaKnown RBP7.52□□□□□ -1.21
SEC16A-201ENST00000277537 MUC15Q8N387 334 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 ZDHHC16Q969W1 377 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 COL5A1P20908 1838 aaPredicted RBP7.52□□□□□ -1.21
SEC16A-201ENST00000277537 DUXBA0A1W2PPF3 345 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 A8MXK9 166 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 CEACAM4O75871 244 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 CNIH1O95406 144 aa7.52□□□□□ -1.21
SEC16A-201ENST00000277537 HRASP01112 189 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms