RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 FAM106CPP0CH98 169 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 MRGPRFQ96AM1 343 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 ZNF665Q9H7R5 613 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 SERGEFQ9UGK8 458 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 C19orf53Q9UNZ5 99 aaPredicted RBP9.68□□□□□ -0.86
MSH6-201ENST00000234420 SPTA1P02549 2419 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 AGAP20933 346 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 UCNP55089 124 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 OR4S2Q8NH73 311 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 TNFSF18Q9UNG2 199 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 DYSFO75923 2080 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 CTSDP07339 412 aaPredicted RBP9.68□□□□□ -0.86
MSH6-201ENST00000234420 SRD5A1P18405 259 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 IGFBP6P24592 240 aaPredicted RBP9.68□□□□□ -0.86
MSH6-201ENST00000234420 KIR2DS2P43631 304 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 MRGPRX4Q96LA9 322 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 EFNB1P98172 346 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 PQLC2Q6ZP29 291 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 ANKRD33Q7Z3H0 272 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 LAT2Q9GZY6 243 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 C1RLQ9NZP8 487 aa9.68□□□□□ -0.86
MSH6-201ENST00000234420 DOCK11Q5JSL3 2073 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 PLA2G10O15496 165 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 HIST1H1AQ02539 215 aaPredicted RBP9.67□□□□□ -0.86
MSH6-201ENST00000234420 C12orf73Q69YU5 71 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 ASCL5Q7RTU5 278 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 SLC25A40Q8TBP6 338 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 DNASE2BQ8WZ79 361 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 TNFRSF12AQ9NP84 129 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 GAPTQ8N292 157 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 PAXXQ9BUH6 204 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 TUBD1Q9UJT1 453 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 DLX6P56179 175 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 NKG7Q16617 165 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
MSH6-201ENST00000234420 SPSB1Q96BD6 273 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 TMEM50AO95807 157 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 CDKN2AP42771 156 aaKnown RBP9.67□□□□□ -0.86
MSH6-201ENST00000234420 KIRREL2Q6UWL6 708 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 OR52M1Q8NGK5 317 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 C9JCJ5 164 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 CFDP00746 253 aaPredicted RBP9.67□□□□□ -0.86
MSH6-201ENST00000234420 CLDN10P78369 228 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 ACVR1Q04771 509 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 MPZL1O95297 269 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 SRD5A2P31213 254 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 NT5CQ8TCD5 201 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
MSH6-201ENST00000234420 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 NPFFO15130 113 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 FKBP2P26885 142 aaKnown RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 TEPPQ6URK8 271 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 OR11H1Q8NG94 326 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 NEUROG1Q92886 237 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 EPPINO95925 133 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 SMDT1Q9H4I9 107 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 SOCS1O15524 211 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF345Q14585 488 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 TARM1B6A8C7 271 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 PITX3O75364 302 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 HBBP68871 147 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF660Q6AZW8 331 aaPredicted RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF562Q6V9R5 426 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ASB5Q8WWX0 329 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 MIXL1Q9H2W2 232 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 HEXA-AS1Q9H8Q6 139 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 SEPSECSQ9HD40 501 aaKnown RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 ABCA3Q99758 1704 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
MSH6-201ENST00000234420 CBLN1P23435 193 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZNF56Q15929 161 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 DEGS2Q6QHC5 323 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 PDCD6O75340 191 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 CGB7P0DN87 165 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ZG16BQ96DA0 208 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 HARBI1Q96MB7 349 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 CCL13Q99616 98 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 ASB1Q9Y576 335 aa9.66□□□□□ -0.86
MSH6-201ENST00000234420 NPIPB6E9PJ23 425 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 CDIPTO14735 213 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 IGHV3-48P01763 117 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 HCP5Q6MZN7 132 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 OR5AC2Q9NZP5 309 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 IL36RNQ9UBH0 155 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 GCM2O75603 506 aaPredicted RBP9.65□□□□□ -0.86
MSH6-201ENST00000234420 LHBP01229 141 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 RAX2Q96IS3 184 aa9.65□□□□□ -0.86
MSH6-201ENST00000234420 HDGFL3Q9Y3E1 203 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms