RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GMPPBQ9Y5P6 360 aa13.48□□□□□ -0.25
CLN6-212ENST00000636020 SAC3D1A6NKF1 404 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 SPDEFO95238 335 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 MAS1P04201 325 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 APOC4P55056 127 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 TCTAP57738 103 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 ZNF554Q86TJ5 538 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 TSNAXQ99598 290 aaKnown RBP13.47□□□□□ -0.25
CLN6-212ENST00000636020 JAM3Q9BX67 310 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 PAK1IP1Q9NWT1 392 aaPredicted RBP13.47□□□□□ -0.25
CLN6-212ENST00000636020 PIPOXQ9P0Z9 390 aa13.47□□□□□ -0.25
CLN6-212ENST00000636020 J3QLW9 94 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 UBE2CO00762 179 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 RAB29O14966 203 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 XRCC3O43542 346 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 SC5DO75845 299 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 GTF2F2P13984 249 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 ZNF19P17023 458 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 LGALS7P47929 136 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 DMKNQ6E0U4 476 aaPredicted RBP13.46□□□□□ -0.25
CLN6-212ENST00000636020 RAB12Q6IQ22 244 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 GVQW1Q8N7I0 195 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 CIB1Q99828 191 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 COA4Q9NYJ1 87 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 KCNIP1Q9NZI2 227 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 OAZ3Q9UMX2 235 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
CLN6-212ENST00000636020 DAPL1A0PJW8 107 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 PRSS29PA6NIE9 313 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 J3QRE1 110 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 CA11O75493 328 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 RPSAP08865 295 aaKnown RBP13.45□□□□□ -0.26
CLN6-212ENST00000636020 SLC22A6Q4U2R8 563 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 TSEN15Q8WW01 171 aaKnown RBP13.45□□□□□ -0.26
CLN6-212ENST00000636020 C4orf36Q96KX1 117 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 ALG8Q9BVK2 526 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 GABARAPL1Q9H0R8 117 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 TAS2R4Q9NYW5 299 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 LRP1BQ9NZR2 4599 aa13.45□□□□□ -0.26
CLN6-212ENST00000636020 FAM90A23PA8MXZ1 464 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 ZNF780AO75290 641 aaPredicted RBP13.44□□□□□ -0.26
CLN6-212ENST00000636020 IGKV1-16P04430 117 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 IFNA4P05014 189 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 NANOS2P60321 138 aaKnown RBP13.44□□□□□ -0.26
CLN6-212ENST00000636020 PJVKQ0ZLH3 352 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 ANKRD55Q3KP44 614 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 RFKQ969G6 155 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 GALMQ96C23 342 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 CYYR1Q96J86 154 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 S100A13Q99584 98 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 SLC29A1Q99808 456 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 PDCD1LG2Q9BQ51 273 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 VCX3BQ9H321 246 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 APLNQ9ULZ1 77 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
CLN6-212ENST00000636020 TMEM212A6NML5 194 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 CBLN1P23435 193 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
CLN6-212ENST00000636020 RPS16P62249 146 aaKnown RBP13.43□□□□□ -0.26
CLN6-212ENST00000636020 RBMS2Q15434 407 aaKnown RBP13.43□□□□□ -0.26
CLN6-212ENST00000636020 ZNF57Q68EA5 555 aaPredicted RBP13.43□□□□□ -0.26
CLN6-212ENST00000636020 PACRGLQ8N7B6 248 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 OR5AK2Q8NH90 309 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 C8orf4Q9NR00 106 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 FBXL17Q9UF56 701 aa13.43□□□□□ -0.26
CLN6-212ENST00000636020 ZNF230Q9UIE0 474 aaPredicted RBP13.43□□□□□ -0.26
CLN6-212ENST00000636020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
CLN6-212ENST00000636020 G3V2T6 193 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 EI24O14681 340 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 RTL8CO15255 209 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 GPX5O75715 221 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 CPEP16870 476 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 EXOSC2Q13868 293 aaKnown RBP13.42□□□□□ -0.26
CLN6-212ENST00000636020 ZDHHC13Q8IUH4 622 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 CBR4Q8N4T8 237 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 ADAD2Q8NCV1 583 aaKnown RBP13.42□□□□□ -0.26
CLN6-212ENST00000636020 OR8J1Q8NGP2 316 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 KCNG3Q8TAE7 436 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
CLN6-212ENST00000636020 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 THRSPQ92748 146 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 ABHD14BQ96IU4 210 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 SULT4A1Q9BR01 284 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 TMEM138Q9NPI0 162 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 MLXQ9UH92 298 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 LRRC42Q9Y546 428 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 DMRT1Q9Y5R6 373 aa13.42□□□□□ -0.26
CLN6-212ENST00000636020 KIR2DL5BA0A0G2JN68 375 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 KIR2DL5BA0A0G2JPC4 375 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 UBE2QL1A1L167 161 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms