RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 AQP3Q92482 292 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 CTHRC1Q96CG8 243 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 ZMAT5Q9UDW3 170 aaKnown RBP11.02□□□□□ -0.65
SCN8A-209ENST00000627620 IFNL4K9M1U5 179 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 CDK2AP1O14519 115 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 MPDU1O75352 247 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 CHAC2Q8WUX2 184 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 C16orf92Q96LL3 132 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 IGKV1D-42A0A075B6H8 117 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 PLAUP00749 431 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 MFAP2P55001 183 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 CXorf66Q5JRM2 361 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-209ENST00000627620 FGFRL1Q8N441 504 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 RAB24Q969Q5 203 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 SULT1A2P50226 295 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 P2RY4P51582 365 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 SELENOTP62341 195 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 METTL26Q96S19 204 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 TUBD1Q9UJT1 453 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 APC2O95996 2303 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 LOC389332A0A1B0GUA5 103 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 SLC25A38Q96DW6 304 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 CHODLQ9H9P2 273 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 C9orf172C9J069 976 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 NDUFB4O95168 129 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 OR10J6PQ8NGY7 276 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 RNF115Q9Y4L5 304 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 F12P00748 615 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-209ENST00000627620 UNC119Q13432 240 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 GPR146Q96CH1 333 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 PRDM14Q9GZV8 571 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 PITPNC1Q9UKF7 332 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 SEC16AO15027 2179 aa11.01□□□□□ -0.65
SCN8A-209ENST00000627620 A0A087X0M5 115 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 A0A1B0GX30 115 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 GUCA2BQ16661 112 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 TM4SF20Q53R12 229 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 FAM181AQ8N9Y4 354 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SCARF2Q96GP6 870 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 A0A1W2PS18 150 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SLC25A17O43808 307 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SPSB2Q99619 263 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 G6PC2Q9NQR9 355 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 UNC13CQ8NB66 2214 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 PPIAL4CA0A0B4J2A2 164 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 A0A1W2PR77 199 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 KLF7O75840 302 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 COX5BP10606 129 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 NUBP1P53384 320 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 GPHA2Q96T91 129 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 ELF5Q9UKW6 265 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 PIN1P1O15428 100 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 IGLV3-21P80748 117 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 UBE2V2Q15819 145 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SELENOHQ8IZQ5 122 aaKnown RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 FOXJ2Q9P0K8 574 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 A8MWL6 223 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SS18L1O75177 396 aaPredicted RBP11□□□□□ -0.65
SCN8A-209ENST00000627620 TIAF1O95411 115 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 RND2P52198 227 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 MIC13Q5XKP0 118 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 PRDM6Q9NQX0 595 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 CABIN1Q9Y6J0 2220 aa11□□□□□ -0.65
SCN8A-209ENST00000627620 SAXO1Q8IYX7 474 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 NRIP2Q9BQI9 281 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 PIMREGQ9BSJ6 248 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 SFXN3Q9BWM7 321 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 RP1P56715 2156 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 MIA3Q5JRA6 1907 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 LOC101059948A0A1B0GTJ6 334 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 PRR19A6NJB7 356 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 C1QL1O75973 258 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 GFRA1P56159 465 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 ZNF343Q6P1L6 599 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 VN1R17PQ8TDU5 208 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 ZNF430Q9H8G1 570 aaPredicted RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 SSTR5P35346 364 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 MAS1LP35410 378 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 ARF6P62330 175 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 CD200R1LQ6Q8B3 271 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 LEAP2Q969E1 77 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 POLR2AP24928 1970 aaKnown RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 SUCLG1P53597 346 aaKnown RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 FAM3BP58499 235 aaPredicted RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 POM121Q96HA1 1249 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 STRCP1A6NGW2 1772 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 PGPA6NDG6 321 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 IFITM10A6NMD0 228 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms