RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 OR2W1Q9Y3N9 320 aa16.21■□□□□ 0.19
PTCD3-220ENST00000627371 RBM7Q9Y580 266 aaKnown RBP16.21■□□□□ 0.19
PTCD3-220ENST00000627371 CLPSL1A2RUU4 121 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 DPPA5A6NC42 116 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 PROP1O75360 226 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 TUSC2O75896 110 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 MOSP00540 346 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 CT45A6P0DMU7 189 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 CT45A5P0DMU8 189 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 CT45A7P0DMV0 189 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 HNF4GQ14541 408 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 CDK10Q15131 360 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
PTCD3-220ENST00000627371 DIRAS2Q96HU8 199 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 ABHD1Q96SE0 405 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 ZNF702PQ9H963 129 aa16.2■□□□□ 0.18
PTCD3-220ENST00000627371 M0QZK8 103 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 OR5H8P0DN80 308 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 TAS2R46P59540 309 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 Q8N2B8 174 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 PRSS22Q9GZN4 317 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 SDHAF2Q9NX18 166 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 RABL2AQ9UBK7 228 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-220ENST00000627371 RABL2BQ9UNT1 228 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 A3GALT2U3KPV4 340 aa16.19■□□□□ 0.18
PTCD3-220ENST00000627371 OR5H14A6NHG9 310 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 AMY1AP04745 511 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 AMY2AP04746 511 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 RCVRNP35243 200 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 LUMP51884 338 aaPredicted RBP16.18■□□□□ 0.18
PTCD3-220ENST00000627371 BLCAPP62952 87 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 OR5AN1Q8NGI8 311 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 OR2T6Q8NHC8 308 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 C5orf30Q96GV9 206 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 MMP27Q9H306 513 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 RNF114Q9Y508 228 aa16.18■□□□□ 0.18
PTCD3-220ENST00000627371 IGKV1D-13A0A0B4J2D9 117 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 H0YJW9 148 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 M0R1X1 148 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 FGF16O43320 207 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 IGKV1-13P0DP09 117 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 FCGR2CP31995 323 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 RNASE12Q5GAN4 147 aaKnown RBP16.17■□□□□ 0.18
PTCD3-220ENST00000627371 FOXB2Q5VYV0 432 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 PYHIN1Q6K0P9 492 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 C11orf88Q6PI97 169 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 FAM131AQ6UXB0 335 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 GLDNQ6ZMI3 551 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-220ENST00000627371 OVCH2Q7RTZ1 564 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 LYSMD2Q8IV50 215 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 ZNF645Q8N7E2 425 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 C5orf56Q8N8D9 126 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-220ENST00000627371 OR5H2Q8NGV7 314 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 OR52I2Q8NH67 350 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 EHFQ9NZC4 300 aa16.17■□□□□ 0.18
PTCD3-220ENST00000627371 J3QRK9 145 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 SLC22A5O76082 557 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 PPYP01298 95 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 PMP2P02689 132 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 AADACP22760 399 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 HLA-DMAP28067 261 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 TNFSF8P32971 234 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 MC5RP33032 325 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 PROK1P58294 105 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 ACTBP60709 375 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 MRPS10P82664 201 aaKnown RBP16.16■□□□□ 0.18
PTCD3-220ENST00000627371 DYRK1AQ13627 763 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 IL18Q14116 193 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 Q6ZS46 218 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 ZNF383Q8NA42 475 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 OR8H1Q8NGG4 311 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 RBMXL1Q96E39 390 aaKnown RBP16.16■□□□□ 0.18
PTCD3-220ENST00000627371 SIGLEC9Q9Y336 463 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 WASHC3Q9Y3C0 194 aa16.16■□□□□ 0.18
PTCD3-220ENST00000627371 GABARAPH6UMI1 98 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 CTDSPLO15194 276 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 HRH1P35367 487 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 RFX2P48378 723 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 ABCA11PQ4W5N1 156 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 C3orf56Q8N813 242 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 GIMAP1Q8WWP7 306 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 FCAMRQ8WWV6 532 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 PLSCR3Q9NRY6 295 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 KLK11Q9UBX7 282 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 MTFP1Q9UDX5 166 aa16.15■□□□□ 0.18
PTCD3-220ENST00000627371 NCBP2LA6PVI3 153 aaKnown RBP16.14■□□□□ 0.17
PTCD3-220ENST00000627371 RBBP9O75884 186 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 IGLV2-14P01704 120 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 LINC00205P59089 165 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 DGCR2P98153 550 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 ZNF660Q6AZW8 331 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-220ENST00000627371 DHRS11Q6UWP2 260 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 Q8N9W7 124 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 SMIM4Q8WVI0 70 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 WFDC12Q8WWY7 111 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 ZNF747Q9BV97 191 aa16.14■□□□□ 0.17
PTCD3-220ENST00000627371 SH2D7A6NKC9 451 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-220ENST00000627371 H7C2Y5 167 aa16.13■□□□□ 0.17
PTCD3-220ENST00000627371 APOA2P02652 100 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms