RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 BRS3P32247 399 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 SMUG1Q53HV7 270 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 CLVS2Q5SYC1 327 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 SLC25A42Q86VD7 318 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
CLK1-215ENST00000621181 C12orf45Q8N5I9 185 aaPredicted RBP6.23□□□□□ -1.41
CLK1-215ENST00000621181 OR5M8Q8NGP6 311 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 OR13C3Q8NGS6 347 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 ADAT3Q96EY9 351 aaPredicted RBP6.23□□□□□ -1.41
CLK1-215ENST00000621181 LINC00052Q96N35 136 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 SLC25A33Q9BSK2 321 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
CLK1-215ENST00000621181 HES4Q9HCC6 221 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 GPR173Q9NS66 373 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 RAB22AQ9UL26 194 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 VSIG4Q9Y279 399 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 SESN1Q9Y6P5 492 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 U3KQK5 164 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 KIAA2026Q5HYC2 2103 aa6.23□□□□□ -1.41
CLK1-215ENST00000621181 PQLC2LA1A4F0 135 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TMEM14DPA8MWL7 114 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ZNF736B4DX44 427 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 SSX5O60225 188 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ZNF737O75373 536 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 BPNT1O95861 308 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 SLC25A4P12235 298 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 MEF2CQ06413 473 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 DHRS2Q13268 280 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 C9orf152Q5JTZ5 239 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 RAB12Q6IQ22 244 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 GSG1LQ6UXU4 331 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TCF23Q7RTU1 214 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 HSD17B13Q7Z5P4 300 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 TRAPPC6BQ86SZ2 158 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ANGPTL5Q86XS5 388 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 OSR2Q8N2R0 312 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TPRX1Q8N7U7 411 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 CCDC107Q8WV48 283 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 UQCC2Q9BRT2 126 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TMEM133Q9H2Q1 129 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 RDH8Q9NYR8 311 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ZMAT5Q9UDW3 170 aaKnown RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 ZNF230Q9UIE0 474 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 LINC00312Q9Y6C7 94 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 RYR3Q15413 4870 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 A0A0A6YYD4 124 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 PSMB11A5LHX3 300 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TMEM235A6NFC5 223 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 BET1O15155 118 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 OR2F2O95006 317 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 IGLV3-1P01715 115 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 AMY2AP04746 511 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 FCER2P06734 321 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 NAT1P18440 290 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 CCL1P22362 96 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 GABRR1P24046 479 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 BDKRB2P30411 391 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 THBS3P49746 956 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ERVK11-1P61568 191 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 IL24Q13007 206 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 MEF2DQ14814 521 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 C4orf46Q504U0 113 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 LPCAT3Q6P1A2 487 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ALKAL2Q6UX46 152 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 SLC51BQ86UW2 128 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 KCNRGQ8N5I3 272 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 BVESQ8NE79 360 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 OR52N4Q8NGI2 321 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 OR4P4Q8NGL7 312 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 ZNF596Q8TC21 504 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TNFAIP8L1Q8WVP5 186 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 FGGYQ96C11 551 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 RBM14Q96PK6 669 aaKnown RBP6.22□□□□□ -1.41
CLK1-215ENST00000621181 ARL6Q9H0F7 186 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 DPM3Q9P2X0 92 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 TNFSF18Q9UNG2 199 aa6.22□□□□□ -1.41
CLK1-215ENST00000621181 FXYD6-FXYD2A0A087WZ82 144 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 FAM230AA0A1W2PPH8 454 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 RNF222A6NCQ9 220 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 DBX1A6NMT0 343 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 C3orf84H3BNL1 204 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 M0QZK8 103 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 CYB5AP00167 134 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 MGMTP16455 207 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 ZNF345Q14585 488 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 SLC22A6Q4U2R8 563 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 ETV3LQ6ZN32 361 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 LYG2Q86SG7 212 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 ZNF329Q86UD4 541 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 RTN4RL2Q86UN3 420 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 ABHD12Q8N2K0 398 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 JAGN1Q8N5M9 183 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 MITD1Q8WV92 249 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 SNX22Q96L94 193 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms