RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 SNAPC3Q92966 411 aa14.39□□□□□ -0.11
IRF3-216ENST00000597180 OR2D2Q9H210 308 aa14.39□□□□□ -0.11
IRF3-216ENST00000597180 TET2Q6N021 2002 aaPredicted RBP14.38□□□□□ -0.11
IRF3-216ENST00000597180 SH2D7A6NKC9 451 aaPredicted RBP14.38□□□□□ -0.11
IRF3-216ENST00000597180 H0YJW9 148 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 PRSS3P35030 304 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 VDAC2P45880 294 aaPredicted RBP14.38□□□□□ -0.11
IRF3-216ENST00000597180 TMEM95Q3KNT9 176 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 KLHDC1Q8N7A1 406 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 Q8N9W7 124 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 WIPF2Q8TF74 440 aaPredicted RBP14.38□□□□□ -0.11
IRF3-216ENST00000597180 RBMXL1Q96E39 390 aaKnown RBP14.38□□□□□ -0.11
IRF3-216ENST00000597180 WNT10AQ9GZT5 417 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 SDHAF2Q9NX18 166 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 OR2W1Q9Y3N9 320 aa14.38□□□□□ -0.11
IRF3-216ENST00000597180 MEIS3P1A6NDR6 274 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 NCBP2LA6PVI3 153 aaKnown RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 FAM25AB3EWG3 89 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 FAM25CB3EWG5 89 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 FAM25GB3EWG6 89 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 TUSC2O75896 110 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 NAT1P18440 290 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 NFYAP23511 347 aaPredicted RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 MC5RP33032 325 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 F2RL1P55085 397 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 ARPC4P59998 168 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 ARSJQ5FYB0 599 aaPredicted RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 FAM131AQ6UXB0 335 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 GLDNQ6ZMI3 551 aaPredicted RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 FAM71E2Q8N5Q1 922 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 ZNF383Q8NA42 475 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 GPX8Q8TED1 209 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 C5orf30Q96GV9 206 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 RBM38Q9H0Z9 239 aaKnown RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 SCPEP1Q9HB40 452 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 IFT46Q9NQC8 304 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 LIN7CQ9NUP9 197 aaKnown RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 ADAM30Q9UKF2 790 aa14.37□□□□□ -0.11
IRF3-216ENST00000597180 MRPS7Q9Y2R9 242 aaKnown RBP14.37□□□□□ -0.11
IRF3-216ENST00000597180 M0R1X1 148 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 TPPPO94811 219 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 VSIG10L2P0DP72 767 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 ACTBP60709 375 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 OR5AP2Q8NGF4 316 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 RITA1Q96K30 269 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 MIXL1Q9H2W2 232 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 NECAP2Q9NVZ3 263 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 WASHC3Q9Y3C0 194 aa14.36□□□□□ -0.11
IRF3-216ENST00000597180 RBM7Q9Y580 266 aaKnown RBP14.36□□□□□ -0.11
IRF3-216ENST00000597180 SULT1C2O00338 296 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 IGHG2P01859 326 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 FCER2P06734 321 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 LUMP51884 338 aaPredicted RBP14.35□□□□□ -0.11
IRF3-216ENST00000597180 C9orf152Q5JTZ5 239 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 DRAXINQ8NBI3 349 aaPredicted RBP14.35□□□□□ -0.11
IRF3-216ENST00000597180 NPBQ8NG41 125 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 SGMS2Q8NHU3 365 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 SLIRPQ9GZT3 109 aaKnown RBP14.35□□□□□ -0.11
IRF3-216ENST00000597180 EXTL2Q9UBQ6 330 aa14.35□□□□□ -0.11
IRF3-216ENST00000597180 IGKV1D-13A0A0B4J2D9 117 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 CTDSP2O14595 271 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 PEX14O75381 377 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 RBBP9O75884 186 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 IGKV1-13P0DP09 117 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 LINC00205P59089 165 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 CDK10Q15131 360 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 MMDQ15546 238 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 SNX29P2Q8IUI4 249 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 LAX1Q8IWV1 398 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 ZNF645Q8N7E2 425 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 RNF5Q99942 180 aa14.34□□□□□ -0.11
IRF3-216ENST00000597180 H7C2Y5 167 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 ZNF701M0R085 212 aaPredicted RBP14.33□□□□□ -0.12
IRF3-216ENST00000597180 NBR2O15453 112 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 RGS5O15539 181 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 SLC22A5O76082 557 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 NDUFA3O95167 84 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 APOA2P02652 100 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 OR5H8P0DN80 308 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 CNTFRP26992 372 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 FCGR2CP31995 323 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 TAS2R46P59540 309 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 TAGLNQ01995 201 aaKnown RBP14.33□□□□□ -0.12
IRF3-216ENST00000597180 PDPNQ86YL7 162 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 RASL11BQ9BPW5 248 aa14.33□□□□□ -0.12
IRF3-216ENST00000597180 NXF2Q9GZY0 626 aaKnown RBP14.33□□□□□ -0.12
IRF3-216ENST00000597180 RSL24D1Q9UHA3 163 aaKnown RBP14.33□□□□□ -0.12
IRF3-216ENST00000597180 PLXNB1O43157 2135 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 CCDC160A6NGH7 325 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 IGLV2-14P01704 120 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 AADACP22760 399 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
IRF3-216ENST00000597180 THBS3P49746 956 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 OVCH2Q7RTZ1 564 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 SLC35E3Q7Z769 313 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 LYSMD2Q8IV50 215 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 C15orf40Q8WUR7 153 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 GIMAP1Q8WWP7 306 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 DDB2Q92466 427 aa14.32□□□□□ -0.12
IRF3-216ENST00000597180 ADTRPQ96IZ2 230 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms