RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TMEM268Q5VZI3 342 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 TRAT1Q6PIZ9 186 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 FAM185AQ8N0U4 392 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 EIF4E3Q8N5X7 224 aaKnown RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 SLC35G3Q8N808 338 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 OR1S2Q8NGQ3 325 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 NCOR1P1Q9H4R4 102 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 OR6C3Q9NZP0 311 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 HEXAP06865 529 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 GZMHP20718 246 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 RPL7L1Q6DKI1 246 aaKnown RBP10.93□□□□□ -0.66
VRK3-205ENST00000593919 TCF23Q7RTU1 214 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 OR52M1Q8NGK5 317 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 RFESDQ8TAC1 157 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 IGFBPL1Q8WX77 278 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 EAF1Q96JC9 268 aaPredicted RBP10.93□□□□□ -0.66
VRK3-205ENST00000593919 CHODLQ9H9P2 273 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 UBE2J1Q9Y385 318 aaPredicted RBP10.93□□□□□ -0.66
VRK3-205ENST00000593919 OR2W1Q9Y3N9 320 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
VRK3-205ENST00000593919 ANKRD17O75179 2603 aaKnown RBP10.93□□□□□ -0.66
VRK3-205ENST00000593919 GPR31O00270 319 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 SPINT2O43291 252 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 PPIHO43447 177 aaKnown RBP10.92□□□□□ -0.66
VRK3-205ENST00000593919 NDUFB3O43676 98 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
VRK3-205ENST00000593919 LRRC10Q5BKY1 277 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 FAM53AQ6NSI3 398 aaPredicted RBP10.92□□□□□ -0.66
VRK3-205ENST00000593919 LDLRAD3Q86YD5 345 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 STPG2Q8N412 459 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 SMIM3Q9BZL3 60 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 PARP12Q9H0J9 701 aaKnown RBP10.92□□□□□ -0.66
VRK3-205ENST00000593919 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 ARHGAP32A7KAX9 2087 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 POLQO75417 2590 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 TRGV10A0A0A0MS01 117 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 J3KRW8 73 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 DVL1O14640 695 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 FGF16O43320 207 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 CEACAM6P40199 344 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 EFNA4P52798 201 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 GNMTQ14749 295 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 CLEC9AQ6UXN8 241 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 OR52L2PQ8NGH6 319 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 TIMD4Q96H15 378 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 CCL19Q99731 98 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 TMEM222Q9H0R3 208 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 FBXL17Q9UF56 701 aa10.92□□□□□ -0.66
VRK3-205ENST00000593919 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
VRK3-205ENST00000593919 IGHV3-43A0A0B4J1X8 118 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 E5RGE8 158 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 TAAR5O14804 337 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 TNFSF12O43508 249 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 CGB3P0DN86 165 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 CGB7P0DN87 165 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 IGHV3-43DP0DP04 118 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 OMGP23515 440 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 RND3P61587 244 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 RPL31P62899 125 aaKnown RBP10.91□□□□□ -0.66
VRK3-205ENST00000593919 SRPXP78539 464 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 C17orf58Q2M2W7 97 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 ZNF695Q8IW36 515 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 RNF141Q8WVD5 230 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 RAB1CQ92928 201 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 MS4A7Q9GZW8 240 aaPredicted RBP10.91□□□□□ -0.66
VRK3-205ENST00000593919 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
VRK3-205ENST00000593919 NSG2Q9Y328 171 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 TMED3Q9Y3Q3 217 aa10.91□□□□□ -0.66
VRK3-205ENST00000593919 COL8A1P27658 744 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 PPP1CCP36873 323 aaKnown RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 TMEM33P57088 247 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 HTD2P86397 168 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 LTC4SQ16873 150 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 C1orf122Q6ZSJ8 110 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 ZNF295-AS1Q8N0V1 137 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 BPIFCQ8NFQ6 507 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 H1FXQ92522 213 aaKnown RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 PLEKHA2Q9HB19 425 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 LINC00312Q9Y6C7 94 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 WNK2Q9Y3S1 2297 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 KBTBD11-OT1A0A1B0GTJ5 212 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 hADV38S2A0JD32 116 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 ZNF273Q14593 569 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 TMEM155Q4W5P6 130 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 SELENOHQ8IZQ5 122 aaKnown RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 OR10V1Q8NGI7 309 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 OR4D5Q8NGN0 318 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 CORO2AQ92828 525 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 MARC2Q969Z3 335 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 BSCL2Q96G97 398 aaPredicted RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.66
VRK3-205ENST00000593919 TOLLIPQ9H0E2 274 aa10.9□□□□□ -0.66
VRK3-205ENST00000593919 CLN8Q9UBY8 286 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms