RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	CLDN12	P56749	244 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	KRTAP12-2	P59991	146 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	ITGB3BP	Q13352	177 aa	Predicted RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	MED21	Q13503	144 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	TTC33	Q6PID6	262 aa	Predicted RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	DRAM2	Q6UX65	266 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZFP62	Q8NB50	900 aa	Predicted RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	OR8J2	Q8NGG1	315 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	KLF14	Q8TD94	323 aa	Predicted RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	C2orf15	Q8WU43	125 aa	Known RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	RBP7	Q96R05	134 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	BTRC	Q9Y297	605 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	YLPM1	P49750	1951 aa	Known RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	THADA	Q6YHU6	1953 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	NF1	P21359	2839 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	IGHV3OR16-8	A0A075B7F1	116 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF98	A6NK75	572 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	TMEM250	H0YL14	139 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009		K7EM74	188 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	ISLR	O14498	428 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	HPGDS	O60760	199 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	PRB1	P04280	392 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	PSKH1	P11801	424 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	HIST1H1C	P16403	213 aa	Known RBP	3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	CNTFR	P26992	372 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	COIL	P38432	576 aa	Predicted RBP	3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	ACTR1B	P42025	376 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	TBC1D28	Q2M2D7	210 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	ELP2	Q6IA86	826 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	XKRX	Q6PP77	449 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	FAM131A	Q6UXB0	335 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	C16orf47	Q6ZP98	133 aa	Predicted RBP	3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	DPPA2	Q7Z7J5	298 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF615	Q8N8J6	731 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	OR8S1	Q8NH09	359 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	CLDN23	Q96B33	292 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	SPZ1	Q9BXG8	430 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	INIP	Q9NRY2	104 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	NOTCH1	P46531	2555 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	CHD7	Q9P2D1	2997 aa		3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	CPSF1	Q10570	1443 aa	Known RBP	3.16	□□□□□ -1.9
TUBD1-208	ENST00000588009	FN1	P02751	2386 aa	Known RBP	3.15	□□□□□ -1.9
TUBD1-208	ENST00000588009	KIF1B	O60333	1816 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	CCRL2	O00421	344 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	RBBP9	O75884	186 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	KCNK2	O95069	426 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	IL9	P15248	144 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	AZU1	P20160	251 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	HLA-DMA	P28067	261 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	HOXA6	P31267	233 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	HSPA13	P48723	471 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	PAFAH1B3	Q15102	231 aa	Known RBP	3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	LRRC26	Q2I0M4	334 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	FAM19A3	Q7Z5A8	133 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	TMEM144	Q7Z5S9	345 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	MTERF4	Q7Z6M4	381 aa	Known RBP	3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	TMEM156	Q8N614	296 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	TMEM251	Q8N6I4	163 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	OR52E4	Q8NGH9	312 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	STOML3	Q8TAV4	291 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	CHST5	Q9GZS9	411 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	METTL9	Q9H1A3	318 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	NUP205	Q92621	2012 aa		3.15	□□□□□ -1.91
TUBD1-208	ENST00000588009	SCN7A	Q01118	1682 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	ABCC11	Q96J66	1382 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	DDX60L	Q5H9U9	1706 aa	Known RBP	3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	IGLV2-18	A0A075B6J9	118 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	DAPL1	A0PJW8	107 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	IGLL5	B9A064	214 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009		J3QKU1	62 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	SOX14	O95416	240 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	ASS1	P00966	412 aa	Known RBP	3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	IGLV7-43	P04211	117 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	PTHLH	P12272	177 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	BLVRA	P53004	296 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	MP68	P56378	58 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	MRPS15	P82914	257 aa	Known RBP	3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	SKP2	Q13309	424 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	C4orf26	Q17RF5	130 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	CLEC12B	Q2HXU8	276 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	DNAL1	Q4LDG9	190 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	CASP12	Q6UXS9	341 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	PAGE2	Q7Z2X7	111 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	HMGN2P46	Q86SG4	172 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	AMN1	Q8IY45	258 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	RBPMS	Q93062	196 aa	Known RBP	3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	YIPF5	Q969M3	257 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	SMIM12	Q96EX1	92 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	MBOAT7	Q96N66	472 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	PLA2G12A	Q9BZM1	189 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	NSRP1	Q9H0G5	558 aa	Known RBP	3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	DNHD1	Q96M86	4753 aa		3.14	□□□□□ -1.91
TUBD1-208	ENST00000588009	ATR	Q13535	2644 aa		3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	JMJD1C	Q15652	2540 aa		3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	FLNC	Q14315	2725 aa		3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	IGHV1-45	A0A0A0MS14	117 aa		3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	IGHV3-43	A0A0B4J1X8	118 aa		3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	POP7	O75817	140 aa	Known RBP	3.13	□□□□□ -1.91
TUBD1-208	ENST00000588009	AHSA1	O95433	338 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms