RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 SLC25A17O43808 307 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 PSG2P11465 335 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 MMP9P14780 707 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 GNG4P50150 75 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 POLR2GP62487 172 aaKnown RBP eCLIP8.7□□□□□ -1.02
MSI2-209ENST00000579483 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 ZNF426Q9BUY5 554 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 QTRT1Q9BXR0 403 aaKnown RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 NPVFQ9HCQ7 196 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 HELTA6NFD8 242 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 FXYD3Q14802 87 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 LRRC75BQ2VPJ9 315 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 SAMD13Q5VXD3 122 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 RXFP4Q8TDU9 374 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 G6PC2Q9NQR9 355 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 FAM90A26D6RGX4 464 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 SLC6A1P30531 599 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 ZNF154Q13106 437 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 Q6ZNX1 250 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 RBM14Q96PK6 669 aaKnown RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 AICDAQ9GZX7 198 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 GOLT1BQ9Y3E0 138 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 TRBV5-7A0A0A0MS05 114 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 RAMP1O60894 148 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 RAB5AP20339 215 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 AMELYQ99218 206 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 NKX6-2Q9C056 277 aaPredicted RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 GPR179Q6PRD1 2367 aa8.7□□□□□ -1.02
MSI2-209ENST00000579483 MTCL1Q9Y4B5 1905 aaKnown RBP8.7□□□□□ -1.02
MSI2-209ENST00000579483 NINQ8N4C6 2090 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 SEC14L6B5MCN3 397 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 MPC2O95563 127 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 LINC01590Q5TEZ4 76 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 YTHDF2Q9Y5A9 579 aaKnown RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 TMEM56-RWDD3S4R434 201 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 TPPP2P59282 170 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 B2MP61769 119 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 SNRPD3P62318 126 aaKnown RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 TCF15Q12870 199 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 H3F3CQ6NXT2 135 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 ADAD2Q8NCV1 583 aaKnown RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 Q96M66 194 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 TLNRD1Q9H1K6 362 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 IGHV3OR16-10A0A075B7F0 116 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 HPXP02790 462 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 GLIPR1P48060 266 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 OR5M8Q8NGP6 311 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 SLC25A28Q96A46 364 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 OPN4Q9UHM6 478 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 V9GYS6 101 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 ALX3O95076 343 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 TMEM78Q5T7P6 136 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 TMEM91Q6ZNR0 172 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 MRPL37Q9BZE1 423 aaKnown RBP8.69□□□□□ -1.02
MSI2-209ENST00000579483 GPR61Q9BZJ8 451 aa8.69□□□□□ -1.02
MSI2-209ENST00000579483 IGSF23A1L1A6 192 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 PINLYPA6NC86 204 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 PCP4L1A6NKN8 68 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 KBTBD11O94819 623 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 VDAC2P45880 294 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 TMEM50BP56557 158 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 TOLLIPQ9H0E2 274 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 KCNK15Q9H427 330 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 TRGV3P03979 118 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 WFIKKN1Q96NZ8 548 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 FNDC1Q4ZHG4 1894 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 SPTBP11277 2137 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 IGHV1-18A0A0C4DH31 117 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 KBTBD11-OT1A0A1B0GTJ5 212 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 ZNF705GA8MUZ8 300 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 NPPCP23582 126 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 ZNF385CQ66K41 422 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 MYPOPQ86VE0 399 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 TNFRSF14Q92956 283 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 DUX5Q96PT3 197 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 SH3BGRL3Q9H299 93 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 RLFQ13129 1914 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 RHBDL1O75783 438 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 MOSP00540 346 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 RD3LP0DJH9 198 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 CEBPDP49716 269 aaPredicted RBP8.68□□□□□ -1.02
MSI2-209ENST00000579483 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
MSI2-209ENST00000579483 ZNRF1Q8ND25 227 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms