RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
USB1-208ENST00000563207 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
USB1-208ENST00000563207 A6NDX4 124 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 FABP12A6NFH5 140 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 HSD17B6O14756 317 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 LANCL1O43813 399 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 RBBP9O75884 186 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 CD28P10747 220 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 RCVRNP35243 200 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 ACTBP60709 375 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 IL18Q14116 193 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 H1FOOQ8IZA3 346 aaPredicted RBP12.52□□□□□ -0.41
USB1-208ENST00000563207 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.52□□□□□ -0.41
USB1-208ENST00000563207 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
USB1-208ENST00000563207 SNAPC3Q92966 411 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 SOSTQ9BQB4 213 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 RAB18Q9NP72 206 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 PLXNB1O43157 2135 aa12.52□□□□□ -0.41
USB1-208ENST00000563207 MEIS3P1A6NDR6 274 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 SLC22A5O76082 557 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 OR3A3P47888 321 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 BLCAPP62952 87 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 CDK10Q15131 360 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 TMEM95Q3KNT9 176 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 ZNF833PQ6ZTB9 187 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 ODF3L1Q8IXM7 274 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 IFI27L2Q9H2X8 130 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 MTFP1Q9UDX5 166 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 ZNF107Q9UII5 783 aaPredicted RBP12.51□□□□□ -0.41
USB1-208ENST00000563207 ZNF221Q9UK13 617 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 OR2W1Q9Y3N9 320 aa12.51□□□□□ -0.41
USB1-208ENST00000563207 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 A0A1W2PPI3 338 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 TUSC2O75896 110 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 FAM106CPP0CH98 169 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 CD24P25063 80 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 ETV6P41212 452 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 NSUN5P1Q3KNT7 163 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 OR6Q1Q8NGQ2 317 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 GIMAP1Q8WWP7 306 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
USB1-208ENST00000563207 RBM7Q9Y580 266 aaKnown RBP12.5□□□□□ -0.41
USB1-208ENST00000563207 SAA2-SAA4A0A096LPE2 208 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 GSTZ1O43708 216 aaPredicted RBP12.49□□□□□ -0.41
USB1-208ENST00000563207 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 SAA2P0DJI9 122 aaPredicted RBP12.49□□□□□ -0.41
USB1-208ENST00000563207 TBPP20226 339 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 CD1BP29016 333 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 GPR12P47775 334 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 LUMP51884 338 aaPredicted RBP12.49□□□□□ -0.41
USB1-208ENST00000563207 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 OR5H2Q8NGV7 314 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 OR8U1Q8NH10 309 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 ABHD14BQ96IU4 210 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 PARP12Q9H0J9 701 aaKnown RBP12.49□□□□□ -0.41
USB1-208ENST00000563207 RANBP3Q9H6Z4 567 aaPredicted RBP12.49□□□□□ -0.41
USB1-208ENST00000563207 TAS2R8Q9NYW2 309 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 KLK11Q9UBX7 282 aa12.49□□□□□ -0.41
USB1-208ENST00000563207 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 NFYAP23511 347 aaPredicted RBP12.48□□□□□ -0.41
USB1-208ENST00000563207 FCGR2CP31995 323 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 DIAPH2-AS1Q14236 149 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 DHRS11Q6UWP2 260 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 MOB3BQ86TA1 216 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 Q8N2B8 174 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
USB1-208ENST00000563207 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
USB1-208ENST00000563207 RBMX2Q9Y388 322 aaKnown RBP12.48□□□□□ -0.41
USB1-208ENST00000563207 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
USB1-208ENST00000563207 OPN1MWP04001 364 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 HRH1P35367 487 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 REG1BP48304 166 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 TAS2R19P59542 299 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 DGCR2P98153 550 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
USB1-208ENST00000563207 EBI3Q14213 229 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms