RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CTLA4P16410 223 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 NTF3P20783 257 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CDK2P24941 298 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 MAP2K4P45985 399 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CDK10Q15131 360 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 FAM201AQ5SY85 155 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 LAIR2Q6ISS4 152 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 NANOGP8Q6NSW7 305 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 PRSS54Q6PEW0 395 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 SBSNQ6UWP8 590 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 KRTCAP2Q8N6L1 136 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ZNF433Q8N7K0 673 aaPredicted RBP2.22□□□□□ -2.05
SPG11-218ENST00000559754 SPANXA2-OT1Q8N9U9 137 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 FER1L6-AS1Q8NA97 138 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ZNF680Q8NEM1 530 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 OR2D3Q8NGH3 330 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 OR8S1Q8NH09 359 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 OR4X1Q8NH49 305 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ITLN2Q8WWU7 325 aaPredicted RBP2.22□□□□□ -2.05
SPG11-218ENST00000559754 CMBLQ96DG6 245 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 MS4A6EQ96DS6 147 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 RBMXL1Q96E39 390 aaKnown RBP2.22□□□□□ -2.05
SPG11-218ENST00000559754 L3HYPDHQ96EM0 354 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 SFRP2Q96HF1 295 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 PYURFQ96I23 114 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ABHD14BQ96IU4 210 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 SIGMAR1Q99720 223 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 KIFC1Q9BW19 673 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ALX4Q9H161 411 aaPredicted RBP2.22□□□□□ -2.05
SPG11-218ENST00000559754 ARMC1Q9NVT9 282 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 VPREB3Q9UKI3 123 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 HHLA2Q9UM44 414 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 IGSF9BQ9UPX0 1349 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 IGHV3-21A0A0B4J1V1 117 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 LEUTXA8MZ59 168 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 K7ERS5 55 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 FSTL3O95633 263 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 LINC00869P0C866 280 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 HIST1H1TP22492 207 aaPredicted RBP2.21□□□□□ -2.06
SPG11-218ENST00000559754 S100A2P29034 98 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 DCCP43146 1447 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 LINC00315P59091 139 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 PSG4Q00888 419 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 PLPPR5Q32ZL2 321 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 C5orf46Q6UWT4 87 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 SMIM15Q7Z3B0 74 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 AMN1Q8IY45 258 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 SAXO1Q8IYX7 474 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 MAL2Q969L2 176 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 RAD51AP1Q96B01 352 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 SLC25A44Q96H78 314 aaPredicted RBP2.21□□□□□ -2.06
SPG11-218ENST00000559754 RNF5Q99942 180 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 B9D2Q9BPU9 175 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 TMEM109Q9BVC6 243 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 TRABDQ9H4I3 376 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 TAS2R1Q9NYW7 299 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 DNAJC12Q9UKB3 198 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 RFNGQ9Y644 331 aa2.21□□□□□ -2.06
SPG11-218ENST00000559754 OTOFQ9HC10 1997 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 SCN4AP35499 1836 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OR5H14A6NHG9 310 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 FAM159BA6NKW6 160 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OR4C45A6NMZ5 311 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 IGLL5B9A064 214 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 C4orf51C9J302 202 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 M0R381 172 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 CCNKO75909 580 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 WISP3O95389 354 aaPredicted RBP2.2□□□□□ -2.06
SPG11-218ENST00000559754 APOMO95445 188 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 PDYNP01213 254 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 LHBP01229 141 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 IGHMP01871 453 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OPN1SWP03999 348 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 CRYGDP07320 174 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 CCL1P22362 96 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OR10J1P30954 320 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 GABRA3P34903 492 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OPRM1P35372 400 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 MPV17P39210 176 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 CA7P43166 264 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 TMEM33P57088 247 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 LINC00313P59037 77 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 SARNPP82979 210 aaKnown RBP2.2□□□□□ -2.06
SPG11-218ENST00000559754 ENDOGQ14249 297 aaKnown RBP2.2□□□□□ -2.06
SPG11-218ENST00000559754 IAH1Q2TAA2 248 aaPredicted RBP2.2□□□□□ -2.06
SPG11-218ENST00000559754 TEX36Q5VZQ5 186 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 TRIQKQ629K1 86 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 LPCAT3Q6P1A2 487 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 C20orf196Q8IYI0 205 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 MIR7-3HGQ8N6C7 128 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 OR4A5Q8NH83 315 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 MCFD2Q8NI22 146 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 LHFPL5Q8TAF8 219 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 UBALD1Q8TB05 177 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 TEX47Q8TBZ9 253 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 CPNE2Q96FN4 548 aaPredicted RBP2.2□□□□□ -2.06
SPG11-218ENST00000559754 IP6K3Q96PC2 410 aa2.2□□□□□ -2.06
SPG11-218ENST00000559754 HOPXQ9BPY8 73 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms