RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 RNF170Q96K19 258 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR2V2Q96R30 315 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 GAL3ST1Q99999 423 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 PDCD10Q9BUL8 212 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 C19orf24Q9BVV8 132 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TM2D1Q9BX74 207 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 ELL3Q9HB65 397 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 PATZ1Q9HBE1 687 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 SPACA1Q9HBV2 294 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 LPAR2Q9HBW0 351 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TMEM106BQ9NUM4 274 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 IL36GQ9NZH8 169 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 MRPL15Q9P015 296 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 OPN4Q9UHM6 478 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 C14orf166Q9Y224 244 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 MAB21L2Q9Y586 359 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 FBN3Q75N90 2809 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 A0A0B4J2A0 478 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 A0A0D9SG52 128 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 C5orf63A6NC05 138 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 HMSDA8MTL9 139 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 A8MXK9 166 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 F5H0A9 414 aaPredicted RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 H0YL77 283 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 IFNL4K9M1U5 179 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 BMPR1BO00238 502 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 MFNGO00587 321 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 TCF21O43680 179 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 FOXH1O75593 365 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SLC22A5O76082 557 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR2A4O95047 310 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 VENTXO95231 258 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 HLA-AP01891 365 aaKnown RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR4E1P0C645 316 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SELEP16581 610 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 ANXA7P20073 488 aaKnown RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 SERPINA2P20848 420 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 S100GP29377 79 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 BLVRBP30043 206 aaPredicted RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 MDH2P40926 338 aaKnown RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 GLP1RP43220 463 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR3A4PP47883 348 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 DHODHQ02127 395 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PAX2Q02962 417 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PAX8Q06710 450 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 MZT1Q08AG7 82 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 UNC119Q13432 240 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 GRK1Q15835 563 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 TMEM128Q5BJH2 165 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 FAM76BQ5HYJ3 339 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 GGNBP1Q5YKI7 109 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PLCXD3Q63HM9 321 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 ASPHD2Q6ICH7 369 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 TMED4Q7Z7H5 227 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 LYG2Q86SG7 212 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SLC25A42Q86VD7 318 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 HOGA1Q86XE5 327 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SAXO1Q8IYX7 474 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR5AS1Q8N127 324 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 C9orf62Q8N4C0 152 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 FAM89BQ8N5H3 189 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR2AK2Q8NG84 335 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR11H7Q8NGC8 314 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR8H1Q8NGG4 311 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 TERB2Q8NHR7 220 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 NANPQ8TBE9 248 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SGK3Q96BR1 496 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 OR2A7Q96R45 310 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SEC22CQ9BRL7 303 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SELENOIQ9C0D9 397 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 LPAR5Q9H1C0 372 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PPA2Q9H2U2 334 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 RIMS4Q9H426 269 aaPredicted RBP4.08□□□□□ -1.76
CASC4-207ENST00000559037 MMP26Q9NRE1 261 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 ZFP57Q9NU63 452 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 TMEM100Q9NV29 134 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PLEKHJ1Q9NW61 149 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 UBQLN2Q9UHD9 624 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SHPKQ9UHJ6 478 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 ANAPC10Q9UM13 185 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PPP1R3CQ9UQK1 317 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 SESN1Q9Y6P5 492 aa4.08□□□□□ -1.76
CASC4-207ENST00000559037 PLXNB1O43157 2135 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 LOC105371242A0A075B767 164 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 hCG_38984A0A1B0GV85 526 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 MEIS3P1A6NDR6 274 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 OR5B21A6NL26 309 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 ANKRD30BLA7E2S9 258 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 CD300LBA8K4G0 201 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 CEACAM18A8MTB9 384 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 GOSR2O14653 212 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 NOS1APO75052 506 aaPredicted RBP4.07□□□□□ -1.76
CASC4-207ENST00000559037 TSC22D2O75157 780 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 DUS4LO95620 317 aaKnown RBP4.07□□□□□ -1.76
CASC4-207ENST00000559037 CYB5R3P00387 301 aaPredicted RBP4.07□□□□□ -1.76
CASC4-207ENST00000559037 GLAP06280 429 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 RPA2P15927 270 aa4.07□□□□□ -1.76
CASC4-207ENST00000559037 GNB3P16520 340 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms