RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 SOX2P48431 317 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 APOC4P55056 127 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 C6orf141Q5SZD1 244 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 DDI2Q5TDH0 399 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 OR8J1Q8NGP2 316 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 OR5AK2Q8NH90 309 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 GALMQ96C23 342 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 RNF183Q96D59 192 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 ALG8Q9BVK2 526 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF230Q9UIE0 474 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-215ENST00000555259 PEX16Q9Y5Y5 336 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 UBE2CO00762 179 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 XRCC3O43542 346 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 CPEP16870 476 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 TCTAP57738 103 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.27
SCFD1-215ENST00000555259 PJVKQ0ZLH3 352 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 RIPK1Q13546 671 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 EXOSC2Q13868 293 aaKnown RBP7.15□□□□□ -1.27
SCFD1-215ENST00000555259 TM4SF20Q53R12 229 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 KDM4DQ6B0I6 523 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 ACBD7Q8N6N7 88 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 KCNG3Q8TAE7 436 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 MRPL30Q8TCC3 161 aaKnown RBP7.15□□□□□ -1.27
SCFD1-215ENST00000555259 CACNG8Q8WXS5 425 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 ABHD14BQ96IU4 210 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 TMEM138Q9NPI0 162 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 STEAP1Q9UHE8 339 aa7.15□□□□□ -1.27
SCFD1-215ENST00000555259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 UBE2QL1A1L167 161 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 E9PI62 339 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 SCAF4O95104 1147 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 IFNA4P05014 189 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 APELAP0DMC3 54 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 CBLN1P23435 193 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 POLR2IP36954 125 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 NANOS2P60321 138 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 RHOGP84095 191 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 GPR176Q14439 515 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 RBMS2Q15434 407 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 ANKRD55Q3KP44 614 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 ZNF57Q68EA5 555 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 GVQW1Q8N7I0 195 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 DRAXINQ8NBI3 349 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 ADAD2Q8NCV1 583 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 C2CD4CQ8TF44 421 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 THRSPQ92748 146 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 NSL1Q96IY1 281 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 SULT4A1Q9BR01 284 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 ISG20L2Q9H9L3 353 aaKnown RBP7.14□□□□□ -1.27
SCFD1-215ENST00000555259 AKIP1Q9NQ31 210 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 FBXL17Q9UF56 701 aa7.14□□□□□ -1.27
SCFD1-215ENST00000555259 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 LGALS9O00182 355 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 GPX5O75715 221 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 HLA-AP01891 365 aaKnown RBP7.13□□□□□ -1.27
SCFD1-215ENST00000555259 GLAP06280 429 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 CTRB1P17538 263 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 BDKRB2P30411 391 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 LINC00205P59089 165 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 PPP3R1P63098 170 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 HMGN3Q15651 99 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 CTRB2Q6GPI1 263 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 SPATA24Q86W54 205 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 PDPNQ86YL7 162 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 FBLIM1Q8WUP2 373 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 IL1F10Q8WWZ1 152 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 CIB1Q99828 191 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 MFFQ9GZY8 342 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 ARGLU1Q9NWB6 273 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-215ENST00000555259 MLXQ9UH92 298 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 LRRC42Q9Y546 428 aa7.13□□□□□ -1.27
SCFD1-215ENST00000555259 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 PPP5D1E7EU14 171 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 G3V2T6 193 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 PROP1O75360 226 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 TUSC2O75896 110 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 IGLV2-23P01705 113 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 PRH1P02810 166 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 CD2P06729 351 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 OR9G9P0C7N8 305 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 FUT3P21217 361 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 ATP5G2Q06055 141 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 SIGIRRQ6IA17 410 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 LHFPL3Q86UP9 236 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 SYS1Q8N2H4 156 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 STPG3Q8N7X2 389 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 ZNF383Q8NA42 475 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 KIR2DL5BQ8NHK3 375 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 OR14A2Q96R54 314 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 PHB2Q99623 299 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 ZNF184Q99676 751 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-215ENST00000555259 ABRACLQ9P1F3 81 aa7.12□□□□□ -1.27
SCFD1-215ENST00000555259 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms