RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 HSPA12AO43301 675 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 PPYP01298 95 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 IGLV2-14P01704 120 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 PI3P19957 117 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 ZBTB25P24278 435 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 IL3RAP26951 378 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 HTR1DP28221 377 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 GNRHRP30968 328 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 GNG10P50151 68 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 LOXL3P58215 753 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 SUPT4H1P63272 117 aaKnown RBP8.86□□□□□ -0.99
SHMT2-218ENST00000555213 HTD2P86397 168 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 TMEM17Q86X19 198 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 BCL6BQ8N143 479 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-218ENST00000555213 SIGLECL1Q8N7X8 197 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 OR52L2PQ8NGH6 319 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 OR10X1Q8NGY0 326 aa8.86□□□□□ -0.99
SHMT2-218ENST00000555213 IGHV3-43A0A0B4J1X8 118 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 LEUTXA8MZ59 168 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 DIRAS3O95661 229 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 RLN1P04808 185 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 CTSDP07339 412 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-218ENST00000555213 OR4E1P0C645 316 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 IGHV3-43DP0DP04 118 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 CEACAM6P40199 344 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 HILS1P60008 231 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 BAMBIQ13145 260 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 SURF2Q15527 256 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-218ENST00000555213 C2orf68Q2NKX9 166 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 HLA-DRB5Q30154 266 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 DEFB112Q30KQ8 113 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 CCDC144NLQ6NUI1 221 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 C8orf31Q8N9H6 132 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 OR2AK2Q8NG84 335 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 OR10V1Q8NGI7 309 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 SSMEM1Q8WWF3 244 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 ST6GAL2Q96JF0 529 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 RSRP1Q9BUV0 290 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 OR51J1Q9H342 316 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 PSG11Q9UQ72 335 aa8.85□□□□□ -0.99
SHMT2-218ENST00000555213 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 SNRPGP15A8MWD9 76 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 J3QR06 171 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 PRAF2O60831 178 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 ZNF134P52741 427 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-218ENST00000555213 PPP1R1AQ13522 171 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 GNMTQ14749 295 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 FCN2Q15485 313 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 OR4P4Q8NGL7 312 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 OR5R1Q8NH85 324 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 OR10J5Q8NHC4 309 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 EDARADDQ8WWZ3 215 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 TOMM40LQ969M1 308 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 RPEQ96AT9 228 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 MALSU1Q96EH3 234 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 CCL28Q9NRJ3 127 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 OR2W1Q9Y3N9 320 aa8.84□□□□□ -0.99
SHMT2-218ENST00000555213 C9orf170A2RU37 121 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 DNAJC9-AS1A6NH13 148 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 OOSP1A8MZH6 123 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 BUB1B-PAK6H3BSN5 160 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 TRIM77I1YAP6 450 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 YPEL1O60688 119 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 PROP1O75360 226 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 IGHV3-7P01780 117 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 TRAPPC2P0DI81 140 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 TRAPPC2BP0DI82 140 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 SULT1A3P0DMM9 295 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 SULT1A4P0DMN0 295 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 CXCL3P19876 107 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 PPP1CCP36873 323 aaKnown RBP8.83□□□□□ -1
SHMT2-218ENST00000555213 RAB7AP51149 207 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 FXYD4P59646 89 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 DHRS2Q13268 280 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 SSX2Q16385 188 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 AANATQ16613 207 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 LRRC75BQ2VPJ9 315 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 MORN2Q502X0 79 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 Q6YL49 198 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 TMED4Q7Z7H5 227 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 LHFPL4Q7Z7J7 247 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 LINC00311Q8N616 119 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 TMEM86BQ8N661 226 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 ZNF431Q8TF32 576 aaPredicted RBP8.83□□□□□ -1
SHMT2-218ENST00000555213 WDR89Q96FK6 387 aaPredicted RBP8.83□□□□□ -1
SHMT2-218ENST00000555213 C5orf30Q96GV9 206 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 ZNF48Q96MX3 618 aaPredicted RBP8.83□□□□□ -1
SHMT2-218ENST00000555213 SCGB3A2Q96PL1 93 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 YPEL2Q96QA6 119 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 AGMATQ9BSE5 352 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 PRDM13Q9H4Q3 707 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms