RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 FBXL7Q9UJT9 491 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 DMRT1Q9Y5R6 373 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.61□□□□□ -0.71
VPS29-209ENST00000551655 ZAR1LA6NP61 321 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 J3QLW9 94 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 UBE2CO00762 179 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 RBBP9O75884 186 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 ZNF19P17023 458 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 MC5RP33032 325 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 SOX2P48431 317 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 MFAP2P55001 183 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 TCTAP57738 103 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 RPS16P62249 146 aaKnown RBP10.61□□□□□ -0.71
VPS29-209ENST00000551655 SLC22A6Q4U2R8 563 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 ADAD2Q8NCV1 583 aaKnown RBP10.61□□□□□ -0.71
VPS29-209ENST00000551655 CANT1Q8WVQ1 401 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 PDCD1LG2Q9BQ51 273 aa10.61□□□□□ -0.71
VPS29-209ENST00000551655 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 SLC16A6O15403 523 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 CPEP16870 476 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 SPATS1Q496A3 300 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 TMEM177Q53S58 311 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 MRPL30Q8TCC3 161 aaKnown RBP10.6□□□□□ -0.71
VPS29-209ENST00000551655 THRSPQ92748 146 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 CPNE2Q96FN4 548 aaPredicted RBP10.6□□□□□ -0.71
VPS29-209ENST00000551655 C4orf36Q96KX1 117 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 TSNAXQ99598 290 aaKnown RBP10.6□□□□□ -0.71
VPS29-209ENST00000551655 KCNIP1Q9NZI2 227 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 PIPOXQ9P0Z9 390 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 TAGLN3Q9UI15 199 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 PEX16Q9Y5Y5 336 aa10.6□□□□□ -0.71
VPS29-209ENST00000551655 RAB29O14966 203 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 PROP1O75360 226 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 SPDEFO95238 335 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 IGHV3-23P01764 117 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 MNAT1P51948 309 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 HTD2P86397 168 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 ATP5G2Q06055 141 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 OR1L6Q8NGR2 347 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 CCDC124Q96CT7 223 aaKnown RBP10.59□□□□□ -0.71
VPS29-209ENST00000551655 ORAI1Q96D31 301 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 NSL1Q96IY1 281 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 PHB2Q99623 299 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 RNF5Q99942 180 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 ALG8Q9BVK2 526 aa10.59□□□□□ -0.71
VPS29-209ENST00000551655 KIR2DL5BA0A0G2JN68 375 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 KIR2DL5BA0A0G2JPC4 375 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 DAPL1A0PJW8 107 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 ZNF320A2RRD8 509 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 E9PI62 339 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 CDK2AP2O75956 126 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 FAM107AO95990 144 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 OR9G9P0C7N8 305 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 GTF2F2P13984 249 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 MRGPRG-AS1Q2M3A8 158 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 DDI2Q5TDH0 399 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 KIR2DL5AQ8N109 375 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 Q8N1X5 172 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 ZNF383Q8NA42 475 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 RARRES2Q99969 163 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 S4R3C0 116 aa10.58□□□□□ -0.72
VPS29-209ENST00000551655 DNAH5Q8TE73 4624 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 LGALS9O00182 355 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 SC5DO75845 299 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 TUSC2O75896 110 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 BAG2O95816 211 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 CRYGBP07316 175 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 ZNF93P35789 620 aaPredicted RBP10.57□□□□□ -0.72
VPS29-209ENST00000551655 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 C19orf35Q6ZS72 473 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 OR5B3Q8NH48 314 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 GALMQ96C23 342 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 TMEM68Q96MH6 324 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 S100A13Q99584 98 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 C11orf68Q9H3H3 251 aaKnown RBP10.57□□□□□ -0.72
VPS29-209ENST00000551655 BANF2Q9H503 90 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 ISG20L2Q9H9L3 353 aaKnown RBP10.57□□□□□ -0.72
VPS29-209ENST00000551655 SPACA1Q9HBV2 294 aa10.57□□□□□ -0.72
VPS29-209ENST00000551655 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 J3QRE1 110 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 GGCTO75223 188 aaKnown RBP10.56□□□□□ -0.72
VPS29-209ENST00000551655 OR2J3O76001 311 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
VPS29-209ENST00000551655 HMGN3Q15651 99 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 SIGIRRQ6IA17 410 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
VPS29-209ENST00000551655 OR2C3Q8N628 320 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms