RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 UNQ9370/PRO34162Q6UXP9 181 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 PRNTQ86SH4 94 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 RBM14Q96PK6 669 aaKnown RBP10.99□□□□□ -0.65
CHD4-211ENST00000544484 SIPA1L1O43166 1804 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 OR2T8A6NH00 312 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 SLC25A17O43808 307 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 CCKARP32238 428 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 SLC35B1P78383 322 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 RBKSQ9H477 322 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 A0A0G2JMM0 328 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 A0A1W2PPB8 328 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 A0A1W2PRS3 328 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 KIR3DP1A8MWS1 328 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 MGPP08493 103 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 VPS25Q9BRG1 176 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 ZNF552Q9H707 407 aaPredicted RBP10.98□□□□□ -0.65
CHD4-211ENST00000544484 ZDHHC8Q9ULC8 765 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 DHRS7CA6NNS2 312 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 TMEM116Q8NCL8 245 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 OR52M1Q8NGK5 317 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 HYPMO75409 117 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 ZNF658BQ4V348 819 aaPredicted RBP10.98□□□□□ -0.65
CHD4-211ENST00000544484 RBPMS2Q6ZRY4 209 aaKnown RBP10.98□□□□□ -0.65
CHD4-211ENST00000544484 Q96M66 194 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 PKIBQ9C010 78 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 TMEM140Q9NV12 185 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 SNURFLB1AK76 121 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 TMEM229AB2RXF0 380 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 RHBDL1O75783 438 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 MMP9P14780 707 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 VKORC1L1Q8N0U8 176 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 IL36RNQ9UBH0 155 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 FDX2Q6P4F2 183 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 VWA1Q6PCB0 445 aa10.98□□□□□ -0.65
CHD4-211ENST00000544484 PGA5P0DJD9 388 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 PF4V1P10720 104 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 RPL8P62917 257 aaKnown RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 STPG2Q8N412 459 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 STXBP6Q8NFX7 210 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 C5orf66Q9H5L9 145 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 RNF115Q9Y4L5 304 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 WNT9BO14905 357 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 SPTBN1Q01082 2364 aaKnown RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 SHISA3A0PJX4 238 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 LINC00862A6NCI5 91 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 LINC00869P0C866 280 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 SNRNP40Q96DI7 357 aaKnown RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 COX6B1P14854 86 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 MUC1P15941 1255 aaPredicted RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 TMEM183BQ1AE95 376 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 SSX8Q7RTT4 187 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 MELTFP08582 738 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 RPL7P18124 248 aaKnown RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 FAM27E3Q08E93 113 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 LRP11Q86VZ4 500 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 ZNRF1Q8ND25 227 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 TMEM54Q969K7 222 aa10.97□□□□□ -0.65
CHD4-211ENST00000544484 ZNF703Q9H7S9 590 aaPredicted RBP10.97□□□□□ -0.65
CHD4-211ENST00000544484 IGKV3D-11A0A0A0MRZ8 115 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 IGHV3-48P01763 117 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 SSTR5P35346 364 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 RIGQ13278 110 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 MIC13Q5XKP0 118 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 TCTEX1D1Q8N7M0 179 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 REG1AP05451 166 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 MC5RP33032 325 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 TLNRD1Q9H1K6 362 aa10.96□□□□□ -0.65
CHD4-211ENST00000544484 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 B4DEV8 164 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 SMPD2O60906 423 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 IGHMP01871 453 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 PPIAL4GP0DN37 164 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 SHISA5Q8N114 240 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A10PA6NDY2 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A18PA6NE21 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A16PA6NEW6 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A20PA6NIJ5 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A8PA6NJQ4 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A7PA6NKC0 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A22PA8MWA6 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A12PA8MX19 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A5PA8MXJ8 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A23PA8MXZ1 464 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 ZG16O60844 167 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 S1PR2O95136 353 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 NDUFB4O95168 129 aa10.96□□□□□ -0.66
CHD4-211ENST00000544484 TBX6O95947 436 aaPredicted RBP10.96□□□□□ -0.66
CHD4-211ENST00000544484 FAM90A15PP0C7V4 464 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms