RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 MEGF9Q9H1U4 602 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 HRASLSQ9HDD0 168 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 ABCB10Q9NRK6 738 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 TXNL1O43396 289 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 SLC22A5O76082 557 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF735P0CB33 412 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF816Q0VGE8 651 aaPredicted RBP9.36□□□□□ -0.91
YBX3-213ENST00000542641 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 AADACL3Q5VUY0 350 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 MOB3BQ86TA1 216 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF645Q8N7E2 425 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
YBX3-213ENST00000542641 OR51S1Q8NGJ8 323 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 TERB2Q8NHR7 220 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 DEDD2Q8WXF8 326 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 MOB3AQ96BX8 217 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 ZNF48Q96MX3 618 aaPredicted RBP9.36□□□□□ -0.91
YBX3-213ENST00000542641 PRRT1Q99946 306 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 CCL28Q9NRJ3 127 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 SDHAF2Q9NX18 166 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 GAB2Q9UQC2 676 aa9.36□□□□□ -0.91
YBX3-213ENST00000542641 IGHV1-3A0A0C4DH29 117 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 OR5H14A6NHG9 310 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 CENPXA8MT69 81 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 M0R1X1 148 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 BRS3P32247 399 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 RAB13P51153 203 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 LRRC75BQ2VPJ9 315 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 FAM71F2Q6NXP2 309 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 Q6YL49 198 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 IDO2Q6ZQW0 420 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 OR8H3Q8N146 312 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 DRAM1Q8N682 238 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 ZNF418Q8TF45 676 aaPredicted RBP9.35□□□□□ -0.91
YBX3-213ENST00000542641 SSX3Q99909 188 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 PRDM13Q9H4Q3 707 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 MXRA5Q9NR99 2828 aa9.35□□□□□ -0.91
YBX3-213ENST00000542641 NAV3Q8IVL0 2385 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 A0A1W2PPI3 338 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 NAP1L6A6NFF2 107 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 TIMM23O14925 209 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 PROP1O75360 226 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 UPK1BO75841 260 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 IGLV2-14P01704 120 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 CT45A6P0DMU7 189 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 CT45A5P0DMU8 189 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 CT45A7P0DMV0 189 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 PGAM2P15259 253 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 GNRHRP30968 328 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 IER3P46695 156 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 UCP3P55916 312 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 AANATQ16613 207 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 DRAXINQ8NBI3 349 aaPredicted RBP9.34□□□□□ -0.91
YBX3-213ENST00000542641 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 AKR1E2Q96JD6 320 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 C7orf50Q9BRJ6 194 aaKnown RBP9.34□□□□□ -0.91
YBX3-213ENST00000542641 MRPL20Q9BYC9 149 aaKnown RBP9.34□□□□□ -0.91
YBX3-213ENST00000542641 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 DPAGT1Q9H3H5 408 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 SLC2A8Q9NY64 477 aa9.34□□□□□ -0.91
YBX3-213ENST00000542641 NSD1Q96L73 2696 aaPredicted RBP9.34□□□□□ -0.91
YBX3-213ENST00000542641 FN1P02751 2386 aaKnown RBP9.34□□□□□ -0.91
YBX3-213ENST00000542641 IGHV3-72A0A0B4J1Y9 119 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 BTBD17A6NE02 478 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 H3BUX3 64 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 PLA2G10O15496 165 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 HOXA3O43365 443 aaPredicted RBP9.33□□□□□ -0.92
YBX3-213ENST00000542641 TNFSF12O43508 249 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 IGHV4-59P01825 116 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 CD24P25063 80 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 ECI1P42126 302 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 DYNLT3P51808 116 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 BAMBIQ13145 260 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 MSMO1Q15800 293 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 ZNF818PQ6ZRF7 136 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 CMTM1Q8IZ96 169 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 SLC38A6Q8IZM9 456 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 ZBTB34Q8NCN2 500 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 OR13C8Q8NGS7 320 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 MARCH1Q8TCQ1 289 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 SSMEM1Q8WWF3 244 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 CAPSLQ8WWF8 208 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 C5orf30Q96GV9 206 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 NABP2Q9BQ15 211 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 RSRP1Q9BUV0 290 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 TNFRSF19Q9NS68 423 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 MTORP42345 2549 aa9.33□□□□□ -0.92
YBX3-213ENST00000542641 TEP1Q99973 2627 aaKnown RBP9.32□□□□□ -0.92
YBX3-213ENST00000542641 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
YBX3-213ENST00000542641 GPR31O00270 319 aa9.32□□□□□ -0.92
YBX3-213ENST00000542641 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
YBX3-213ENST00000542641 CD1BP29016 333 aa9.32□□□□□ -0.92
YBX3-213ENST00000542641 S100GP29377 79 aa9.32□□□□□ -0.92
YBX3-213ENST00000542641 MC5RP33032 325 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms