RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 GJE1A6NN92 205 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 TESK1Q15569 626 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 CNEP1R1Q8N9A8 125 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 TMED3Q9Y3Q3 217 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 KMT2BQ9UMN6 2715 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 IGKV1D-13A0A0B4J2D9 117 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 IGKV1-13P0DP09 117 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 UCP3P55916 312 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
SFSWAP-210ENST00000541286 UCP2P55851 309 aa12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 SPATA46Q5T0L3 261 aa12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 RPUSD4Q96CM3 377 aaKnown RBP12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 C18orf12Q96KH6 178 aa12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 GPR35Q9HC97 309 aa12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 GLRX2Q9NS18 164 aa12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 STRAPQ9Y3F4 350 aaKnown RBP12.15□□□□□ -0.47
SFSWAP-210ENST00000541286 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 RPL36A-HNRNPH2H7BZ11 118 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 CLDN34H7C241 214 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 TCF21O43680 179 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 CHST1O43916 411 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 HERPUD1Q15011 391 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 C9orf106Q8NAJ2 232 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 MSL2Q9HCI7 577 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 POLQO75417 2590 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 M0R143 59 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 NGFP01138 241 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 CST2P09228 141 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 SELEP16581 610 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 MAS1LP35410 378 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 IL13RA2Q14627 380 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 VWA1Q6PCB0 445 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 SEM1Q6ZVN7 128 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 SDSLQ96GA7 329 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
SFSWAP-210ENST00000541286 OR6C6A6NF89 314 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 GZMHP20718 246 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 BPIFB3P59826 476 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 PRDX4Q13162 271 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 NBPF19A0A087WUL8 3843 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 HSPA12AO43301 675 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 CA11O75493 328 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 IAPPP10997 89 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 UQCRFS1P47985 274 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 CPT1CQ8TCG5 803 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 CBY1Q9Y3M2 126 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 TGOLN2O43493 480 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 SYNGR1O43759 233 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 DFFBO76075 338 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 OR10A7Q8NGE5 316 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
SFSWAP-210ENST00000541286 TRAPPC2LH3BP13 241 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 UCNP55089 124 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 ZNF266Q14584 549 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 ARSJQ5FYB0 599 aaPredicted RBP12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 OR5R1Q8NH85 324 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 TRDCB7Z8K6 153 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 IRF2P14316 349 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 TDGF1P3P51864 188 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 FAM3BP58499 235 aaPredicted RBP12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 PCBD1P61457 104 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 GFRALQ6UXV0 394 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 Q6ZVH6 145 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 RAB24Q969Q5 203 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
SFSWAP-210ENST00000541286 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM50AO95807 157 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 SERPINE2P07093 398 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 OR5I1Q13606 314 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 FAM215AQ9Y5M1 114 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 GCN1Q92616 2671 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 SLC22A20A6NK97 555 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 C16orf82Q7Z2V1 217 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 MKXQ8IYA7 352 aa12.11□□□□□ -0.47
SFSWAP-210ENST00000541286 TMEM256Q8N2U0 113 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms