RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 IER3P46695 156 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 CD81P60033 236 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 TFF3Q07654 80 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 Q6ZRM9 215 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 TCF23Q7RTU1 214 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 OR8G5Q8NG78 346 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
MSH6-210ENST00000540021 ANAPC16Q96DE5 110 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 NAGKQ9UJ70 344 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 SPEGQ15772 3267 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 CRYGSP22914 178 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 CCKARP32238 428 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 FOXG1P55316 489 aaPredicted RBP11.04□□□□□ -0.64
MSH6-210ENST00000540021 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
MSH6-210ENST00000540021 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
MSH6-210ENST00000540021 OR2Y1Q8NGV0 311 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 P2RX4Q99571 388 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 SIT1Q9Y3P8 196 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 IGHV1-45A0A0A0MS14 117 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 GCGP01275 180 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 ARL16Q0P5N6 197 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 NMSQ5H8A3 153 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 OR1L1Q8NH94 360 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 TRIOO75962 3097 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 OR4A8P0C604 315 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 HIST3H3Q16695 136 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 FADS6Q8N9I5 356 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
MSH6-210ENST00000540021 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 A0A1B0GUS0 222 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 PATE3B3GLJ2 98 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 M0R1X1 148 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 SPINT2O43291 252 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 GZMBP10144 247 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 GCH1P30793 250 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 AMTP48728 403 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 OR2H2O95918 312 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 FGF5P12034 268 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 PLA2G5P39877 138 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 MAGEA5P43359 124 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 HERPUD1Q15011 391 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 LRRC75BQ2VPJ9 315 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 KIAA1644Q3SXP7 199 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 ZNF826PQ6ZT77 177 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 SPEM1Q8N4L4 309 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 DRAM1Q8N682 238 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 BORCS7Q96B45 105 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
MSH6-210ENST00000540021 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.64
MSH6-210ENST00000540021 CBLN1P23435 193 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 TNFRSF9Q07011 255 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 PRR27Q6MZM9 219 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 DMRTC2Q8IXT2 367 aaPredicted RBP11.02□□□□□ -0.65
MSH6-210ENST00000540021 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
MSH6-210ENST00000540021 ZNF439Q8NDP4 499 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 LYZL6O75951 148 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 S1PR2O95136 353 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 OR10J1P30954 320 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 NUBP1P53384 320 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
MSH6-210ENST00000540021 SIGLEC12Q96PQ1 595 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 OR2J1Q9GZK6 312 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 SPTA1P02549 2419 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 CADP27708 2225 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 TMEM30CPA0ZSE6 113 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 TFF1P04155 84 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 ATP5G3P48201 142 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 EYSQ5T1H1 3165 aa11.02□□□□□ -0.65
MSH6-210ENST00000540021 OR5B21A6NL26 309 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 A6NNC1 897 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 IFNL4K9M1U5 179 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 EREGO14944 169 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 TOX3O15405 576 aaPredicted RBP11.01□□□□□ -0.65
MSH6-210ENST00000540021 COX6A1P12074 109 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
MSH6-210ENST00000540021 GCSAMLQ5JQS6 135 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 C20orf204Q6ZNR8 217 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 A0A1B0GW64 132 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
MSH6-210ENST00000540021 IGLV3-19P01714 112 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 IL11RAQ14626 422 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
MSH6-210ENST00000540021 DEFB108BQ8NET1 73 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 ACY3Q96HD9 319 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 CER1O95813 267 aa11.01□□□□□ -0.65
MSH6-210ENST00000540021 CELA3AP09093 270 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms