RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PSG5Q15238 335 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 PAQR4Q8N4S7 273 aaPredicted RBP13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 OR4F17Q8NGA8 305 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 RTBDNQ9BSG5 229 aaPredicted RBP13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 K7N7A8 449 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 TPPP2P59282 170 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 SPCS3P61009 180 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 OR10A7Q8NGE5 316 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 OR10G8Q8NGN5 311 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 BCL2L2Q92843 193 aaPredicted RBP13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 SEC14L6B5MCN3 397 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 C9orf172C9J069 976 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 OR8B3Q8NGG8 313 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 OR8B2Q96RD0 313 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 THYN1Q9P016 225 aa13.09□□□□□ -0.31
PCDHA3-202ENST00000532566 PDE6DO43924 150 aa13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 MEOX2P50222 304 aa13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 Q56UQ5 140 aa13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 LURAP1Q96LR2 239 aa13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 RSPO3Q9BXY4 272 aaPredicted RBP13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.31
PCDHA3-202ENST00000532566 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 TOX4O94842 621 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 TAF15Q92804 592 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 IFT22Q9H7X7 185 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 NPVFQ9HCQ7 196 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 SPTAN1Q13813 2472 aaKnown RBP13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 SPTBN1Q01082 2364 aaKnown RBP13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 ZNF716A6NP11 495 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 SPINK4O60575 86 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 GYPAP02724 150 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 RBKSQ9H477 322 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 GATCO43716 136 aaKnown RBP13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 IZUMO4Q1ZYL8 232 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 OR4C12Q96R67 309 aa13.08□□□□□ -0.32
PCDHA3-202ENST00000532566 FCN1O00602 326 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 MPDU1O75352 247 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 CXorf1O96002 111 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 DANCRP0C864 163 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 LHX2P50458 406 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 TNFSF10P50591 281 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 DRAM1Q8N682 238 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 CALYQ9NYX4 217 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 HSPB1P04792 205 aaKnown RBP13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 GLIPR1P48060 266 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 C1QTNF12Q5T7M4 302 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 IL19Q9UHD0 177 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 OR51B2Q9Y5P1 312 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 ZNF735P0CB33 412 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 CLDN18P56856 261 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 CSRP2Q16527 193 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 NCMAPQ5T1S8 102 aa13.07□□□□□ -0.32
PCDHA3-202ENST00000532566 REG1BP48304 166 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 KRTDAPP60985 99 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 OR5I1Q13606 314 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 ZNF714Q96N38 554 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 ZDHHC8Q9ULC8 765 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 E9PQ18 207 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 LY6G6FQ5SQ64 297 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 A0A1W2PRD5 423 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 A0A1W2PRF3 423 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 A0A1W2PRM7 423 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 CDX4O14627 284 aaPredicted RBP13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 RHBDL1O75783 438 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 ID4P47928 161 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 SERTM2A0A1B0GWG4 89 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 MARCH11A6NNE9 402 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 SMPD2O60906 423 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 UCP1P25874 307 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 LYZP61626 148 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 RPEL1Q2QD12 228 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 DHRS11Q6UWP2 260 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 PDPNQ86YL7 162 aa13.06□□□□□ -0.32
PCDHA3-202ENST00000532566 CLDN16Q9Y5I7 305 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms