RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 LINC00311Q8N616 119 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 FAM216BQ8N7L0 139 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 TPRX1Q8N7U7 411 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 LY6G5BQ8NDX9 201 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 OR8B3Q8NGG8 313 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 PPP1R1CQ8WVI7 109 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 SEC22AQ96IW7 307 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 OR8B2Q96RD0 313 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 TP53RKQ96S44 253 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 DCTN5Q9BTE1 182 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 SLA2Q9H6Q3 261 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 PATZ1Q9HBE1 687 aaKnown RBP8.14□□□□□ -1.11
TPM3-221ENST00000513769 BARX1Q9HBU1 254 aaPredicted RBP8.14□□□□□ -1.11
TPM3-221ENST00000513769 DCAF16Q9NXF7 216 aa8.14□□□□□ -1.11
TPM3-221ENST00000513769 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
TPM3-221ENST00000513769 TANC2Q9HCD6 1990 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 CENPEQ02224 2701 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 A0A1W2PPR1 153 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 NDUFS8O00217 210 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 PPIHO43447 177 aaKnown RBP8.13□□□□□ -1.11
TPM3-221ENST00000513769 OR2F2O95006 317 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 SIX6O95475 246 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 MPC2O95563 127 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 LY86O95711 162 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 HOXB5P09067 269 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 MMP9P14780 707 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 FOSL1P15407 271 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 KIR2DS2P43631 304 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 PRRX1P54821 245 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 DSCR9P59020 149 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 OR2F1Q13607 317 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
TPM3-221ENST00000513769 KIAA2026Q5HYC2 2103 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 DCAF12L2Q5VW00 463 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 FAM71F2Q6NXP2 309 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 SLC25A48Q6ZT89 311 aaKnown RBP8.13□□□□□ -1.11
TPM3-221ENST00000513769 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 OR11H4Q8NGC9 324 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 TMEM186Q96B77 213 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 S1PR3Q99500 378 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 UBTD1Q9HAC8 227 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 SDHAF2Q9NX18 166 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 NBPF19A0A087WUL8 3843 aa8.13□□□□□ -1.11
TPM3-221ENST00000513769 FAM90A9PA6NNJ1 464 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 G3V3Q6 166 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ADAP1O75689 374 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 HPRT1P00492 218 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 TFF1P04155 84 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ADMP35318 185 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 PPP1CCP36873 323 aaKnown RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 NUP62P37198 522 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 GPR6P46095 362 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 GPR12P47775 334 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ZNF134P52741 427 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ID3Q02535 119 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ZNF345Q14585 488 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 Q5BKY6 102 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 CT45A1Q5HYN5 189 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 TMEM268Q5VZI3 342 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 WDR25Q64LD2 544 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 LAMTOR1Q6IAA8 161 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 PRSS54Q6PEW0 395 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 LYZL2Q7Z4W2 148 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 FGFRL1Q8N441 504 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ZBTB8BQ8NAP8 495 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 INO80EQ8NBZ0 244 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 ZNF439Q8NDP4 499 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 CT45A3Q8NHU0 189 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 WDR89Q96FK6 387 aaPredicted RBP8.12□□□□□ -1.11
TPM3-221ENST00000513769 OR10C1Q96KK4 312 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 RNF126Q9BV68 326 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 OR2D2Q9H210 308 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 RNF150Q9ULK6 438 aa8.12□□□□□ -1.11
TPM3-221ENST00000513769 ANKHD1Q8IWZ3 2542 aaKnown RBP8.11□□□□□ -1.11
TPM3-221ENST00000513769 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 FAM90A26D6RGX4 464 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 F5H0A9 414 aaPredicted RBP8.11□□□□□ -1.11
TPM3-221ENST00000513769 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 ST8SIA3O43173 380 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 PPIAL4GP0DN37 164 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 RRASP10301 218 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 SELLP14151 372 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 COX6B1P14854 86 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 S100A11P31949 105 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 DUTP33316 252 aaKnown RBP8.11□□□□□ -1.11
TPM3-221ENST00000513769 DLX6P56179 175 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 SMCO1Q147U7 214 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 ZNF585BQ52M93 769 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 GPR157Q5UAW9 335 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 TCF23Q7RTU1 214 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 C9orf62Q8N4C0 152 aa8.11□□□□□ -1.11
TPM3-221ENST00000513769 C11orf42Q8N5U0 333 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms