RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 HIST1H1CP16403 213 aaKnown RBP1.31□□□□□ -2.2
LSM6-205ENST00000507449 CRHBPP24387 322 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 SERPINB10P48595 397 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 C2orf91Q6ZV80 131 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 KLF6Q99612 283 aaPredicted RBP1.31□□□□□ -2.2
LSM6-205ENST00000507449 MGLLQ99685 303 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 DCUN1D5Q9BTE7 237 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 ZNF471Q9BX82 626 aaPredicted RBP1.31□□□□□ -2.2
LSM6-205ENST00000507449 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 EIF5A2Q9GZV4 153 aaKnown RBP1.31□□□□□ -2.2
LSM6-205ENST00000507449 CXCL16Q9H2A7 254 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 TMEM106BQ9NUM4 274 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 TXNL4BQ9NX01 149 aaKnown RBP1.31□□□□□ -2.2
LSM6-205ENST00000507449 SNX12Q9UMY4 172 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 HDGFL3Q9Y3E1 203 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 F5H768 121 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 LY6LH3BQJ8 138 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 M0R381 172 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 OVOL1O14753 267 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 GZMBP10144 247 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 UGT2B7P16662 529 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 CD40LGP29965 261 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 IFNGR2P38484 337 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 CD200P41217 278 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 CA7P43166 264 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 EMP2P54851 167 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 MGAT3Q09327 533 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 TMEM31Q5JXX7 168 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 PLEKHG7Q6ZR37 379 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 TMEM251Q8N6I4 163 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 Q8WTZ3 238 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 CYGBQ8WWM9 190 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 ASB13Q8WXK3 278 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 RNASE6Q93091 150 aaKnown RBP1.3□□□□□ -2.2
LSM6-205ENST00000507449 SMIM19Q96E16 107 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 DNAJC30Q96LL9 226 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 MBOAT7Q96N66 472 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 TXNDC17Q9BRA2 123 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 PECRQ9BY49 303 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 PLEKHJ1Q9NW61 149 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 SAMHD1Q9Y3Z3 626 aaKnown RBP1.3□□□□□ -2.2
LSM6-205ENST00000507449 PCNX2A6NKB5 2137 aa1.3□□□□□ -2.2
LSM6-205ENST00000507449 COL4A2P08572 1712 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 IGHV3-15A0A0B4J1V0 119 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 A0A0G2JQZ4 141 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 C1orf232A0A0U1RR37 186 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 A0A1W2PQL4 384 aaPredicted RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 OR5K4A6NMS3 321 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 GOLGA8KD6RF30 607 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 FNDC10F2Z333 226 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 H3BPC8 53 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 GOLGA8MH3BSY2 632 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 SLC17A3O00476 420 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 GSTZ1O43708 216 aaPredicted RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 S1PR2O95136 353 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 ATP6V0CP27449 155 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 CD79BP40259 229 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 SNAP25P60880 206 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 GNA13Q14344 377 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 TPRXLQ17RH7 258 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 TMEM156Q8N614 296 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 PACRGLQ8N7B6 248 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 TMBIM1Q969X1 311 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 PACRGQ96M98 296 aaPredicted RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 MND1Q9BWT6 205 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 DERL2Q9GZP9 239 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 A0A1W2PP64 1363 aa1.29□□□□□ -2.2
LSM6-205ENST00000507449 CHD2O14647 1828 aaKnown RBP1.29□□□□□ -2.2
LSM6-205ENST00000507449 DSCAML1Q8TD84 2053 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 TRAV8-1A0A0A6YYK1 113 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 C11orf86A6NJI1 115 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 OR11H12B2RN74 326 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 J3QKU1 62 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 STX10O60499 249 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 IFI30P13284 250 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 CD36P16671 472 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 CDK9P50750 372 aaKnown RBP1.28□□□□□ -2.2
LSM6-205ENST00000507449 ZNF140P52738 457 aaPredicted RBP1.28□□□□□ -2.2
LSM6-205ENST00000507449 TAS2R45P59539 299 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 RPS24P62847 133 aaKnown RBP1.28□□□□□ -2.2
LSM6-205ENST00000507449 FABP5Q01469 135 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 LGALS9BQ3B8N2 356 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 AMTNQ6UX39 209 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 CCDC121Q6ZUS5 278 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 SPATA12Q7Z6I5 190 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 CNEP1R1Q8N9A8 125 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 OR2D3Q8NGH3 330 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 OR11H2Q8NH07 326 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 Q9BRP9 147 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 TIPINQ9BVW5 301 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 NKX6-2Q9C056 277 aaPredicted RBP1.28□□□□□ -2.2
LSM6-205ENST00000507449 SLC2A9Q9NRM0 540 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 EMC3Q9P0I2 261 aa1.28□□□□□ -2.2
LSM6-205ENST00000507449 PCYT1BQ9Y5K3 369 aaPredicted RBP1.28□□□□□ -2.2
LSM6-205ENST00000507449 COL5A3P25940 1745 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms