RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 DUSP18Q8NEJ0 188 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR51S1Q8NGJ8 323 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR56B4Q8NH76 319 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 TERB2Q8NHR7 220 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 UBALD1Q8TB05 177 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 IL1F10Q8WWZ1 152 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 TNFRSF14Q92956 283 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 MSI2Q96DH6 328 aaKnown RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 CITED4Q96RK1 184 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 PRRT1Q99946 306 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 GINS4Q9BRT9 223 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 AGMATQ9BSE5 352 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 C11orf54Q9H0W9 315 aaPredicted RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 TMEM133Q9H2Q1 129 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR2S2Q9NQN1 319 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 RDH8Q9NYR8 311 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR1A1Q9P1Q5 309 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 SCP2D1Q9UJQ7 156 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR2W1Q9Y3N9 320 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 NOTCH2Q04721 2471 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 ZFHX3Q15911 3703 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 IGHV3-43A0A0B4J1X8 118 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 OR5H14A6NHG9 310 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 J3QLI3 93 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 HSPA12AO43301 675 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 TOX4O94842 621 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 PPYP01298 95 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 IGLV1-47P01700 117 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 IGHV3-43DP0DP04 118 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 AADACP22760 399 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 NFYAP23511 347 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 PPP1CCP36873 323 aaKnown RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 ECI1P42126 302 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 ZNF134P52741 427 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 GNMTQ14749 295 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 SURF2Q15527 256 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 MSMO1Q15800 293 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 TUSC1Q2TAM9 212 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 RNF212Q495C1 297 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 PLA1AQ53H76 456 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 DCAF12L2Q5VW00 463 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 CYB5R2Q6BCY4 276 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 HCP5Q6MZN7 132 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 FAM53AQ6NSI3 398 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 WDR73Q6P4I2 378 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 SLC25A48Q6ZT89 311 aaKnown RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 VMO1Q7Z5L0 202 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 NOXA1Q86UR1 476 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 GLCCI1Q86VQ1 547 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 LDLRAD3Q86YD5 345 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 CIARTQ8N365 385 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 POC5Q8NA72 575 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 OR11H6Q8NGC7 330 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 OR13C8Q8NGS7 320 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 EDARADDQ8WWZ3 215 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 MRGPRFQ96AM1 343 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 MOB3AQ96BX8 217 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 TBX15Q96SF7 602 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 SLC25A21Q9BQT8 299 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 ZNF2Q9BSG1 426 aaPredicted RBP5.88□□□□□ -1.47
NUP54-204ENST00000506098 TMPRSS13Q9BYE2 586 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 HIF1ANQ9NWT6 349 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 COPZ2Q9P299 210 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 ONECUT1Q9UBC0 465 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 GPR132Q9UNW8 380 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 PSG11Q9UQ72 335 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 NAV3Q8IVL0 2385 aa5.88□□□□□ -1.47
NUP54-204ENST00000506098 IGHV2-26A0A0B4J1V2 119 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 IGKV1D-13A0A0B4J2D9 117 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 FAM240BA0A1B0GVZ2 78 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 MPTX1A8MV57 137 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 ODF3BA8MYP8 253 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 RNASEK-C17orf49H0YIS7 233 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 J3QR06 171 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 NUPL2O15504 423 aaKnown RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 SLC22A5O76082 557 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 NDUFB6O95139 128 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 TGFAP01135 160 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 TCRBP04435 133 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 LINC00614P0C842 121 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 IGKV1-13P0DP09 117 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 HOXB4P17483 251 aaPredicted RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 NFYBP25208 207 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 RAB7AP51149 207 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 CCR6P51684 374 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 LUMP51884 338 aaPredicted RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 ZNF137PP52743 207 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 CD81P60033 236 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 RBMS2Q15434 407 aaKnown RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 LTC4SQ16873 150 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 SCGB2B2Q4G0G5 96 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 CT45A1Q5HYN5 189 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 UTF1Q5T230 341 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 NCR3LG1Q68D85 454 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 LPCAT3Q6P1A2 487 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 SSX9Q7RTT3 188 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 ODF3L1Q8IXM7 274 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms