RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IFNGR2P38484 337 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 TSPEAR-AS2P59090 65 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 HERVK_113P63121 156 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 BTN3A2P78410 334 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 HPCAP84074 193 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 SLC36A2Q495M3 483 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 ZNF767PQ75MW2 155 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 OR2D3Q8NGH3 330 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 FNDC9Q8TBE3 224 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 SLC37A2Q8TED4 501 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 Q8WTZ3 238 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 TMBIM1Q969X1 311 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 MS4A6EQ96DS6 147 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 C11orf1Q9H5F2 150 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 HDGFL3Q9Y3E1 203 aa1.8□□□□□ -2.12
SMC4-225ENST00000497203 F5H768 121 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 SLC17A3O00476 420 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 UBFD1O14562 309 aaKnown RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 MRASO14807 208 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 COCHO43405 550 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 GSTZ1O43708 216 aaPredicted RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 LY6HO94772 140 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 NPPCP23582 126 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 BLVRBP30043 206 aaPredicted RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 OR10J1P30954 320 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 CD200P41217 278 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 SNAP25P60880 206 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 FABP5Q01469 135 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 TNFAIP8L2Q6P589 184 aaPredicted RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 ZNF567Q8N184 647 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.79□□□□□ -2.12
SMC4-225ENST00000497203 CPNE2Q96FN4 548 aaPredicted RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 NSRP1Q9H0G5 558 aaKnown RBP1.79□□□□□ -2.12
SMC4-225ENST00000497203 HES4Q9HCC6 221 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 USE1Q9NZ43 259 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 EMC3Q9P0I2 261 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 MMACHCQ9Y4U1 282 aa1.79□□□□□ -2.12
SMC4-225ENST00000497203 A0A0J9YX75 114 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 C5orf49A4QMS7 147 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 ODF3BA8MYP8 253 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 IL6P05231 212 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 ZNF7P17097 686 aaPredicted RBP1.78□□□□□ -2.12
SMC4-225ENST00000497203 DDTP30046 118 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 MAGEA2P43356 314 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 CDC34P49427 236 aaPredicted RBP1.78□□□□□ -2.12
SMC4-225ENST00000497203 ZNF181Q2M3W8 571 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 FAM229BQ4G0N7 80 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 N4BP2L1Q5TBK1 243 aaPredicted RBP1.78□□□□□ -2.12
SMC4-225ENST00000497203 C16orf78Q8WTQ4 265 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 CCL26Q9Y258 94 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 ZNF337Q9Y3M9 751 aa1.78□□□□□ -2.12
SMC4-225ENST00000497203 MYO16Q9Y6X6 1858 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 DHX57Q6P158 1386 aaKnown RBP1.77□□□□□ -2.13
SMC4-225ENST00000497203 TRGV4A0A0C4DH28 118 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 C17orf51A8MQB3 221 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 H3BPC8 53 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 PFDN6O15212 129 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 TRAPPC3O43617 180 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 MT-CO2P00403 227 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 SOD1P00441 154 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 C8orf88P0DMB2 117 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 CXCL3P19876 107 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 CSRP1P21291 193 aaKnown RBP1.77□□□□□ -2.13
SMC4-225ENST00000497203 CRHBPP24387 322 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 GABRA4P48169 554 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 DAPP51397 102 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 HOXC5Q00444 222 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 GNA13Q14344 377 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 AMTNQ6UX39 209 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 DERL2Q9GZP9 239 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 PCYT1BQ9Y5K3 369 aaPredicted RBP1.77□□□□□ -2.13
SMC4-225ENST00000497203 ATG2BQ96BY7 2078 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 ADAMTSL1Q8N6G6 1762 aa1.77□□□□□ -2.13
SMC4-225ENST00000497203 C19orf71A6NCJ1 209 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 TMEM235A6NFC5 223 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 KNCNA6PVL3 124 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 LY6LH3BQJ8 138 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 UBE2L6O14933 153 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 SLC16A4O15374 487 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 NDUFB2O95178 105 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 DEXIO95424 95 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 GZMBP10144 247 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 COX5BP10606 129 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 CXCL2P19875 107 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 TMEM33P57088 247 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 CXCR4P61073 352 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 RPS24P62847 133 aaKnown RBP1.76□□□□□ -2.13
SMC4-225ENST00000497203 HLA-DRB3P79483 266 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 OGFRL1Q5TC84 451 aaPredicted RBP1.76□□□□□ -2.13
SMC4-225ENST00000497203 CST9Q5W186 159 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 BAP18Q8IXM2 172 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 JOSD2Q8TAC2 188 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 DNAJC30Q96LL9 226 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 SLC2A9Q9NRM0 540 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 FGFR1OP2Q9NVK5 253 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 MINOS1-NBL1R4GNA1 71 aa1.76□□□□□ -2.13
SMC4-225ENST00000497203 ABCC11Q96J66 1382 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 VPS37CA5D8V6 355 aaPredicted RBP1.75□□□□□ -2.13
SMC4-225ENST00000497203 M0QZ92 97 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms