RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TMEM176BQ3YBM2 270 aaPredicted RBP2.49□□□□□ -2.01
SSR3-208ENST00000496050 OGFRL1Q5TC84 451 aaPredicted RBP2.49□□□□□ -2.01
SSR3-208ENST00000496050 TNFAIP8L2Q6P589 184 aaPredicted RBP2.49□□□□□ -2.01
SSR3-208ENST00000496050 OR2D3Q8NGH3 330 aa2.49□□□□□ -2.01
SSR3-208ENST00000496050 FNDC9Q8TBE3 224 aa2.49□□□□□ -2.01
SSR3-208ENST00000496050 DDI1Q8WTU0 396 aa2.49□□□□□ -2.01
SSR3-208ENST00000496050 C11orf1Q9H5F2 150 aa2.49□□□□□ -2.01
SSR3-208ENST00000496050 THSD7AQ9UPZ6 1657 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 C5orf49A4QMS7 147 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 PFDN6O15212 129 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 SOD1P00441 154 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 C8orf88P0DMB2 117 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 CD36P16671 472 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 DAPP51397 102 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 TSPEAR-AS2P59090 65 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 N4BP2L1Q5TBK1 243 aaPredicted RBP2.48□□□□□ -2.01
SSR3-208ENST00000496050 CST9Q5W186 159 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 ZNF567Q8N184 647 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
SSR3-208ENST00000496050 MBOAT7Q96N66 472 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 DERL2Q9GZP9 239 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 PCYT1BQ9Y5K3 369 aaPredicted RBP2.48□□□□□ -2.01
SSR3-208ENST00000496050 LCTP09848 1927 aa2.48□□□□□ -2.01
SSR3-208ENST00000496050 IGHV3-73A0A0B4J1V6 119 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 M0QZ92 97 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 SLC17A3O00476 420 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 SLC16A4O15374 487 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 TRAPPC3O43617 180 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 DEXIO95424 95 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 CRHBPP24387 322 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 BLVRAP53004 296 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 HLA-DRB3P79483 266 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 MLLT11Q13015 90 aaPredicted RBP2.47□□□□□ -2.01
SSR3-208ENST00000496050 GNA13Q14344 377 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 ZNF767PQ75MW2 155 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 NAA40Q86UY6 237 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 TMEM156Q8N614 296 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 CPNE2Q96FN4 548 aaPredicted RBP2.47□□□□□ -2.01
SSR3-208ENST00000496050 STACQ99469 402 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 FGFR1OP2Q9NVK5 253 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 TXNL4BQ9NX01 149 aaKnown RBP2.47□□□□□ -2.01
SSR3-208ENST00000496050 ZNF337Q9Y3M9 751 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 CACNA1SQ13698 1873 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 ABCC11Q96J66 1382 aa2.47□□□□□ -2.01
SSR3-208ENST00000496050 COL5A1P20908 1838 aaPredicted RBP2.47□□□□□ -2.01
SSR3-208ENST00000496050 A0A0J9YX75 114 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 VPS37CA5D8V6 355 aaPredicted RBP2.46□□□□□ -2.02
SSR3-208ENST00000496050 M0R381 172 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 TYMSP04818 313 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 CD200P41217 278 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 TMEM33P57088 247 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 SNAP25P60880 206 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 RPS24P62847 133 aaKnown RBP2.46□□□□□ -2.02
SSR3-208ENST00000496050 TMEM31Q5JXX7 168 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 EEF1AKMT1Q8WVE0 214 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.46□□□□□ -2.02
SSR3-208ENST00000496050 ANKRD36BP1Q96IX9 119 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 NKX6-2Q9C056 277 aaPredicted RBP2.46□□□□□ -2.02
SSR3-208ENST00000496050 HES4Q9HCC6 221 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 LTBP2Q14767 1821 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 MAP3K5Q99683 1374 aa2.46□□□□□ -2.02
SSR3-208ENST00000496050 ZNF638Q14966 1978 aaKnown RBP2.45□□□□□ -2.02
SSR3-208ENST00000496050 LRRN3E7EW58 273 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 MT-CO2P00403 227 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 ZNF7P17097 686 aaPredicted RBP2.45□□□□□ -2.02
SSR3-208ENST00000496050 CSRP1P21291 193 aaKnown RBP2.45□□□□□ -2.02
SSR3-208ENST00000496050 DDTP30046 118 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 ZNF181Q2M3W8 571 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 AMTNQ6UX39 209 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 SLC51BQ86UW2 128 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 PIGXQ8TBF5 258 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 C16orf78Q8WTQ4 265 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 POLR1DQ9Y2S0 133 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 KMT2EQ8IZD2 1858 aa2.45□□□□□ -2.02
SSR3-208ENST00000496050 C19orf71A6NCJ1 209 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 ODF3BA8MYP8 253 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 UBE2L6O14933 153 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 BLVRBP30043 206 aaPredicted RBP2.44□□□□□ -2.02
SSR3-208ENST00000496050 PPP1R1AQ13522 171 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 LRRC34Q8IZ02 419 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 JOSD2Q8TAC2 188 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 HAVCR2Q8TDQ0 301 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 ARL5BQ96KC2 179 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 C16orf95Q9H693 158 aa2.44□□□□□ -2.02
SSR3-208ENST00000496050 POLR3HQ9Y535 204 aaPredicted RBP2.44□□□□□ -2.02
SSR3-208ENST00000496050 OTOFQ9HC10 1997 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 PLCH2O75038 1416 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 C17orf51A8MQB3 221 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 H0Y980 276 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 HLA-DRAP01903 254 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 MYL12AP19105 171 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 CRYBB3P26998 211 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 CDK9P50750 372 aaKnown RBP2.43□□□□□ -2.02
SSR3-208ENST00000496050 AP2S1P53680 142 aaPredicted RBP2.43□□□□□ -2.02
SSR3-208ENST00000496050 MAGOHP61326 146 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms