RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 LINC01555Q8NAE3 123 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 ZNF555Q8NEP9 628 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 OR5H2Q8NGV7 314 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 GPR82Q96P67 336 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 NMNAT3Q96T66 252 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 GGTLC1Q9BX51 225 aa4.94□□□□□ -1.62
SNX13-210ENST00000494402 SETD1AO15047 1707 aaKnown RBP4.94□□□□□ -1.62
SNX13-210ENST00000494402 MYH3P11055 1940 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 KIF1BO60333 1816 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 C4orf51C9J302 202 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 DLEU1O43261 78 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 SRSF10O75494 262 aaKnown RBP4.93□□□□□ -1.62
SNX13-210ENST00000494402 ATRNO75882 1429 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 PIAS1O75925 651 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 SLC25A14O95258 325 aaPredicted RBP4.93□□□□□ -1.62
SNX13-210ENST00000494402 ZNF682O95780 498 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 IGLV2-23P01705 113 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 C1QCP02747 245 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 GYPCP04921 128 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 G6PCP35575 357 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 ZNF83P51522 516 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 ZNF140P52738 457 aaPredicted RBP4.93□□□□□ -1.62
SNX13-210ENST00000494402 LINC00205P59089 165 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 DNAJB13P59910 316 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 DEFA6Q01524 100 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 BAMBIQ13145 260 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 RHEBQ15382 184 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 TMEM183BQ1AE95 376 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 SCGB2B2Q4G0G5 96 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 MPV17L2Q567V2 206 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 TMEM183AQ8IXX5 376 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 OR2M3Q8NG83 312 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 THEM6Q8WUY1 208 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 EXOSC8Q96B26 276 aaKnown RBP4.93□□□□□ -1.62
SNX13-210ENST00000494402 MS4A6EQ96DS6 147 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 ABHD14BQ96IU4 210 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 DOHHQ9BU89 302 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 MED11Q9P086 117 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 SLC23A2Q9UGH3 650 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 TAC3Q9UHF0 121 aa4.93□□□□□ -1.62
SNX13-210ENST00000494402 BAZ2AQ9UIF9 1905 aaKnown RBP4.93□□□□□ -1.62
SNX13-210ENST00000494402 ROBO3Q96MS0 1386 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 POGZQ7Z3K3 1410 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
SNX13-210ENST00000494402 C5orf63A6NC05 138 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 J3KT08 172 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 M0R381 172 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 CYB5BO43169 146 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 SUPT7LO94864 414 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 FAM107AO95990 144 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 AMBPP02760 352 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 PPIBP23284 216 aaKnown RBP4.92□□□□□ -1.62
SNX13-210ENST00000494402 TAF6P49848 677 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 PIGPP57054 158 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 GNA12Q03113 381 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 KRTAP1-1Q07627 177 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 SGPP2Q8IWX5 399 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 Q8N377 158 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 FAM57AQ8TBR7 257 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 OR5P3Q8WZ94 311 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 THTPAQ9BU02 230 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 ZNF696Q9H7X3 374 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 KCNIP2Q9NS61 270 aa4.92□□□□□ -1.62
SNX13-210ENST00000494402 NUFIP1Q9UHK0 495 aaKnown RBP4.92□□□□□ -1.62
SNX13-210ENST00000494402 ZCCHC11Q5TAX3 1644 aaKnown RBP4.92□□□□□ -1.62
SNX13-210ENST00000494402 GON4LQ3T8J9 2241 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 A0A1B0GX51 115 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 TMEM189A5PLL7 270 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 RIIAD1A6NNX1 92 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 GSTZ1O43708 216 aaPredicted RBP4.91□□□□□ -1.62
SNX13-210ENST00000494402 HLA-DQB2P05538 268 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 TNFAIP6P98066 277 aaPredicted RBP4.91□□□□□ -1.62
SNX13-210ENST00000494402 OR8B8Q15620 311 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 MRPL2Q5T653 305 aaKnown RBP4.91□□□□□ -1.62
SNX13-210ENST00000494402 EBLN2Q6P2I7 272 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 MARCH3Q86UD3 253 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 PDPNQ86YL7 162 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 OR5A1Q8NGJ0 315 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 GPR119Q8TDV5 335 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 LITAFQ99732 161 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 VCXQ9H320 206 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 CXorf21Q9HAI6 301 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 RPS6KB2Q9UBS0 482 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 HSPB8Q9UJY1 196 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 DNAJC12Q9UKB3 198 aa4.91□□□□□ -1.62
SNX13-210ENST00000494402 KMT2EQ8IZD2 1858 aa4.9□□□□□ -1.62
SNX13-210ENST00000494402 IGHV1OR15-9A0A0B4J2B8 117 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 IGKV6-21A0A0C4DH24 114 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 TMX2-CTNND1H3BSU7 103 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 IFNA7P01567 189 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 IGLV2-11P01706 119 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 IGHV3-11P01762 117 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CSN2P05814 226 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 RBP1P09455 135 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 RPS4Y1P22090 263 aaKnown RBP4.9□□□□□ -1.63
SNX13-210ENST00000494402 ACVRL1P37023 503 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CA7P43166 264 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms