RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 OCIAD2Q56VL3 154 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 MESTQ5EB52 335 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 CENPWQ5EE01 88 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM236Q5W0B7 351 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 KDM4DQ6B0I6 523 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 PRSS54Q6PEW0 395 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ARL9Q6T311 187 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 SCIMPQ6UWF3 145 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 Q6ZRU5 148 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 Q6ZSR6 202 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 H2AFVQ71UI9 128 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TCF23Q7RTU1 214 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 VN1R4Q7Z5H5 301 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 PTAR1Q7Z6K3 402 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF584Q8IVC4 421 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ZCCHC24Q8N2G6 241 aaKnown RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM86AQ8N2M4 240 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ACBD7Q8N6N7 88 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 DCAF4L2Q8NA75 395 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM178AQ8NBL3 297 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 LY6G5BQ8NDX9 201 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 NUP35Q8NFH5 326 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TSTD1Q8NFU3 115 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 OR4E2Q8NGC2 313 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 OR2T4Q8NH00 348 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 OR51H1Q8NH63 302 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 GEMIN6Q8WXD5 167 aaKnown RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 FRZBQ92765 325 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ADAT3Q96EY9 351 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 CNRIP1Q96F85 164 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 SLC25A44Q96H78 314 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM101Q96IK0 257 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 SMIM8Q96KF7 97 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TSPAN32Q96QS1 320 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF649Q9BS31 505 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM147Q9BVK8 224 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 LINC00470Q9BZP3 86 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 EIF5A2Q9GZV4 153 aaKnown RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM222Q9H0R3 208 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 DEFB127Q9H1M4 99 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 IFI27L2Q9H2X8 130 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 POPDC3Q9HBV1 291 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ZNF71Q9NQZ8 489 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TMEM38BQ9NVV0 291 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 MED11Q9P086 117 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 CLCF1Q9UBD9 225 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 LAMTOR3Q9UHA4 124 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TBX21Q9UL17 535 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TRAPPC2LQ9UL33 140 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ZFP30Q9Y2G7 519 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 FIS1Q9Y3D6 152 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 HES2Q9Y543 173 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 ENPP4Q9Y6X5 453 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 TTC37Q6PGP7 1564 aa1.66□□□□□ -2.14
PTPN12-212ENST00000494248 DENND4BO75064 1496 aaPredicted RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 RAPGEF2Q9Y4G8 1499 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 IBTKQ9P2D0 1353 aaPredicted RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 TRBV19A0A075B6N1 114 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 TRAV8-1A0A0A6YYK1 113 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 IGHV2-26A0A0B4J1V2 119 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 IGHV7-81A0A0B4J1V7 117 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 IGHV1-69DA0A0B4J2H0 117 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 LOC389332A0A1B0GUA5 103 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 DUXBA0A1W2PPF3 345 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 C5orf63A6NC05 138 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 OR4C45A6NMZ5 311 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 CD300LBA8K4G0 201 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 F5H5P2 479 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 K7N7A8 449 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 M0R2Z0 102 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 UPK1AO00322 258 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 FFAR1O14842 300 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 GYG2O15488 501 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF207O43670 478 aaKnown RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ANGPTL7O43827 346 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 GNG7O60262 68 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF354AO60765 605 aaPredicted RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 SS18L1O75177 396 aaPredicted RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 KCNK2O95069 426 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 DUS4LO95620 317 aaKnown RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF682O95780 498 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 NRASP01111 189 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 GYPCP04921 128 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 HLA-DQB2P05538 268 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 PSG2P11465 335 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 CPMP14384 443 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF30P17039 623 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 AQP1P29972 269 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 OR10J1P30954 320 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 BTCP35070 178 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 EIF2B2P49770 351 aaKnown RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 LHX2P50458 406 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 NCBP2P52298 156 aaKnown RBP eCLIP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF140P52738 457 aaPredicted RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 GFERP55789 205 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 TAS2R46P59540 309 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 PKIAP61925 76 aa1.65□□□□□ -2.15
PTPN12-212ENST00000494248 CYCSP99999 105 aaKnown RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 FKBP3Q00688 224 aaKnown RBP1.65□□□□□ -2.15
PTPN12-212ENST00000494248 IFITM3Q01628 133 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms