RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SLC25A53Q5H9E4 307 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 GCSAMLQ5JQS6 135 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 OR2W1Q9Y3N9 320 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 ATP23Q9Y6H3 246 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 COX11Q9Y6N1 276 aa9.91□□□□□ -0.82
HDAC4-210ENST00000493582 TRAV39A0A0B4J263 110 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 SYNGR4O95473 234 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 COX5AP20674 150 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 PTGDSP41222 190 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF738Q8NE65 137 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 OR4C5Q8NGB2 326 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 UBALD1Q8TB05 177 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 PARD6GQ9BYG4 376 aaPredicted RBP9.9□□□□□ -0.82
HDAC4-210ENST00000493582 NRN1Q9NPD7 142 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF586Q9NXT0 402 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 TIMM9Q9Y5J7 89 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 CABIN1Q9Y6J0 2220 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 KIR2DS1A0A191URI9 304 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 F6UZH7 168 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 TMPRSS2O15393 492 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 SYNGR3O43761 229 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 CA3P07451 260 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 PMCHP20382 165 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 KIR2DS4P43632 304 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 KIR2DS1Q14954 304 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 PRAMEF20Q5VT98 475 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF324BQ6AW86 544 aaPredicted RBP9.9□□□□□ -0.82
HDAC4-210ENST00000493582 RHBDD2Q6NTF9 364 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 Q6ZS49 121 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 GNB4Q9HAV0 340 aa9.9□□□□□ -0.82
HDAC4-210ENST00000493582 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 NPIPA2E9PIF3 369 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 NPIPA3F8WFD2 350 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 SIRPB1O00241 398 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 SPINK4O60575 86 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 AMTP48728 403 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 HLA-DRB5Q30154 266 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 KIAA1644Q3SXP7 199 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF585BQ52M93 769 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 FOXL2NBQ6ZUU3 175 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 OR1F12Q8NHA8 337 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 TMEM54Q969K7 222 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 OR1A1Q9P1Q5 309 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 ABCA7Q8IZY2 2146 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 TOMM40O96008 361 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 FAM27BQ5VT28 67 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 TMEM14EPQ6UXP3 125 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 OR10G8Q8NGN5 311 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 RDH5Q92781 318 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 LSM10Q969L4 123 aaKnown RBP9.89□□□□□ -0.83
HDAC4-210ENST00000493582 CLDN23Q96B33 292 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 MTIF3Q9H2K0 278 aaKnown RBP9.89□□□□□ -0.83
HDAC4-210ENST00000493582 CLN8Q9UBY8 286 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 SNURFLB1AK76 121 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 GDF9O60383 454 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF32P17041 273 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 TIMP3P35625 211 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 FASLGP48023 281 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 FBLN7Q53RD9 439 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 VPS25Q9BRG1 176 aa9.89□□□□□ -0.83
HDAC4-210ENST00000493582 hCG_38984A0A1B0GV85 526 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 WDR1O75083 606 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 CTXN2P0C2S0 81 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 B4GALT1P15291 398 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 CDC34P49427 236 aaPredicted RBP9.88□□□□□ -0.83
HDAC4-210ENST00000493582 VHLLQ6RSH7 139 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 LMX1AQ8TE12 382 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 KLHDC7BQ96G42 594 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 NPCDR1Q9BY65 106 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 IGFLR1Q9H665 355 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 RBM7Q9Y580 266 aaKnown RBP9.88□□□□□ -0.83
HDAC4-210ENST00000493582 IGHV2OR16-5A0A0B4J2B6 119 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 PDE6DO43924 150 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 TSPOP30536 169 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 APOBEC3DQ96AK3 386 aaPredicted RBP9.88□□□□□ -0.83
HDAC4-210ENST00000493582 LOXL4Q96JB6 756 aa9.88□□□□□ -0.83
HDAC4-210ENST00000493582 CCL5P13501 91 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 FAM19A2Q8N3H0 131 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 FGFRL1Q8N441 504 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 FGFBP3Q8TAT2 258 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 A8MXE2 369 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 ZNF253O75346 499 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 GPM6AP51674 278 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 Q0VG73 95 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 DEFB133Q30KQ1 61 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 SPINK9Q5DT21 86 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 NFAM1Q8NET5 270 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-210ENST00000493582 TMEM147Q9BVK8 224 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
HDAC4-210ENST00000493582 BET1LQ9NYM9 111 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 CRIM1Q9NZV1 1036 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 GTF3C1Q12789 2109 aa9.87□□□□□ -0.83
HDAC4-210ENST00000493582 IGHV2-70DA0A0C4DH43 119 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms