RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 OR4A4PQ8NGN8 299 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 OR1L1Q8NH94 360 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 DYNC2LI1Q8TCX1 351 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 NEK7Q8TDX7 302 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 ST8SIA2Q92186 375 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 S100A16Q96FQ6 103 aaKnown RBP5.39□□□□□ -1.55
VPS52-219ENST00000493379 SSX3Q99909 188 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 ZNF251Q9BRH9 671 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 HDHD3Q9BSH5 251 aaPredicted RBP5.39□□□□□ -1.55
VPS52-219ENST00000493379 CHIAQ9BZP6 476 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 NXF2Q9GZY0 626 aaKnown RBP5.39□□□□□ -1.55
VPS52-219ENST00000493379 ATG5Q9H1Y0 275 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 C16orf95Q9H693 158 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 AUNIPQ9H7T9 357 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 OR2S2Q9NQN1 319 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 DIABLOQ9NR28 239 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 VPREB3Q9UKI3 123 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 LYSTQ99698 3801 aa5.39□□□□□ -1.55
VPS52-219ENST00000493379 A0A1B0GUS0 222 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 A0A1W2PPI3 338 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 SDCBPO00560 298 aaPredicted RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 TOR1AO14656 332 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 LANCL1O43813 399 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 RGS11O94810 467 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 GAPDHP04406 335 aaKnown RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 SCTP09683 121 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 CD3GP09693 182 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 CTXN2P0C2S0 81 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 ZBTB25P24278 435 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 NFYBP25208 207 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 CD1BP29016 333 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 KIR2DS4P43632 304 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 HLA-DRB3P79483 266 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 MADCAM1Q13477 382 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 KIR2DS1Q14954 304 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 SSX2Q16385 188 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 UBE2NLQ5JXB2 153 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 FAM53AQ6NSI3 398 aaPredicted RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 CCDC144NLQ6NUI1 221 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 C16orf82Q7Z2V1 217 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 C5orf24Q7Z6I8 188 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 HOGA1Q86XE5 327 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 CLVS1Q8IUQ0 354 aaPredicted RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 OR52L2PQ8NGH6 319 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 NDNFQ8TB73 568 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 ISOC1Q96CN7 298 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 SOSTQ9BQB4 213 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 SLIRPQ9GZT3 109 aaKnown RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 C1RLQ9NZP8 487 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 ELF5Q9UKW6 265 aaPredicted RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 TCF19Q9Y242 345 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 AMMECR1Q9Y4X0 333 aaPredicted RBP5.38□□□□□ -1.55
VPS52-219ENST00000493379 A3GALT2U3KPV4 340 aa5.38□□□□□ -1.55
VPS52-219ENST00000493379 CSMD3Q7Z407 3707 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 TRAV18A0A075B6X5 111 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 IGKV1D-8A0A087WSZ0 117 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 A0A1W2PRD5 423 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 A0A1W2PRF3 423 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 A0A1W2PRM7 423 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RBMY1BA6NDE4 496 aaKnown RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 RBMY1EA6NEQ0 496 aaKnown RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 TMEM235A6NFC5 223 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 H3BMQ9 156 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 H3BUX3 64 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 SULT1C2O00338 296 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 SLC31A2O15432 143 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 FABP7O15540 132 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 TXNL1O43396 289 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 GPR137BO60478 399 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RBMY1DP0C7P1 496 aaKnown RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 GSTT2P0CG29 244 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 GSTT2BP0CG30 244 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 BRS3P32247 399 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 CBX5P45973 191 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 FOXL1Q12952 345 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 DIAPH2-AS1Q14236 149 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 MZT2AQ6P582 158 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 CNIH2Q6PI25 160 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 DHRS11Q6UWP2 260 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 ZNF833PQ6ZTB9 187 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 IZUMO1Q8IYV9 350 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 Q8N6K4 173 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RTN4IP1Q8WWV3 396 aaPredicted RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 AP3S1Q92572 193 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 LEAP2Q969E1 77 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 DGCR14Q96DF8 476 aaKnown RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 IFI27L2Q9H2X8 130 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RANBP3Q9H6Z4 567 aaPredicted RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 RAB18Q9NP72 206 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 PLSCR3Q9NRY6 295 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 CCDC59Q9P031 241 aaKnown RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 NDUFA13Q9P0J0 144 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 PIPOXQ9P0Z9 390 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 GNG12Q9UBI6 72 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RABL2AQ9UBK7 228 aaPredicted RBP5.37□□□□□ -1.55
VPS52-219ENST00000493379 ANXA10Q9UJ72 324 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 PITPNC1Q9UKF7 332 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 RABL2BQ9UNT1 228 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 STAB2Q8WWQ8 2551 aa5.37□□□□□ -1.55
VPS52-219ENST00000493379 IGHV1-3A0A0C4DH29 117 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms